Protein–RNA interactions for Protein: O75935

DCTN3, Dynactin subunit 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCTN3O75935 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.63■□□□□ 0.57
DCTN3O75935 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DCTN3O75935 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DCTN3O75935 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.63■□□□□ 0.57
DCTN3O75935 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
DCTN3O75935 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
DCTN3O75935 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
DCTN3O75935 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DCTN3O75935 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DCTN3O75935 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.63■□□□□ 0.57
DCTN3O75935 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DCTN3O75935 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.63■□□□□ 0.57
DCTN3O75935 AC016405.3-201ENST00000607710 860 ntBASIC18.63■□□□□ 0.57
DCTN3O75935 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.63■□□□□ 0.57
DCTN3O75935 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DCTN3O75935 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DCTN3O75935 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.63■□□□□ 0.57
DCTN3O75935 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
DCTN3O75935 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DCTN3O75935 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
DCTN3O75935 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
DCTN3O75935 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.62■□□□□ 0.57
DCTN3O75935 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DCTN3O75935 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
DCTN3O75935 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DCTN3O75935 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
DCTN3O75935 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
DCTN3O75935 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.62■□□□□ 0.57
DCTN3O75935 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DCTN3O75935 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DCTN3O75935 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.62■□□□□ 0.57
DCTN3O75935 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.62■□□□□ 0.57
DCTN3O75935 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
DCTN3O75935 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DCTN3O75935 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
DCTN3O75935 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.62■□□□□ 0.57
DCTN3O75935 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
DCTN3O75935 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DCTN3O75935 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
DCTN3O75935 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.62■□□□□ 0.57
DCTN3O75935 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
DCTN3O75935 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DCTN3O75935 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DCTN3O75935 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
DCTN3O75935 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.61■□□□□ 0.57
DCTN3O75935 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
DCTN3O75935 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
DCTN3O75935 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.61■□□□□ 0.57
DCTN3O75935 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.61■□□□□ 0.57
DCTN3O75935 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DCTN3O75935 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
DCTN3O75935 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
DCTN3O75935 PKD1P1-201ENST00000458669 6805 ntBASIC18.61■□□□□ 0.57
DCTN3O75935 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DCTN3O75935 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DCTN3O75935 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.61■□□□□ 0.57
DCTN3O75935 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.61■□□□□ 0.57
DCTN3O75935 KRT18P68-201ENST00000392293 1000 ntBASIC18.61■□□□□ 0.57
DCTN3O75935 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DCTN3O75935 SLC25A6P5-201ENST00000435663 894 ntBASIC18.61■□□□□ 0.57
DCTN3O75935 AC096631.2-201ENST00000436136 790 ntBASIC18.61■□□□□ 0.57
DCTN3O75935 TERF1P5-201ENST00000477545 1207 ntBASIC18.61■□□□□ 0.57
DCTN3O75935 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.61■□□□□ 0.57
DCTN3O75935 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DCTN3O75935 AC099398.1-201ENST00000567919 2776 ntBASIC18.61■□□□□ 0.57
DCTN3O75935 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
DCTN3O75935 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.61■□□□□ 0.57
DCTN3O75935 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DCTN3O75935 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DCTN3O75935 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DCTN3O75935 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DCTN3O75935 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
DCTN3O75935 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DCTN3O75935 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DCTN3O75935 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DCTN3O75935 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.6■□□□□ 0.57
DCTN3O75935 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
DCTN3O75935 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
DCTN3O75935 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DCTN3O75935 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DCTN3O75935 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DCTN3O75935 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.6■□□□□ 0.57
DCTN3O75935 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DCTN3O75935 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DCTN3O75935 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
DCTN3O75935 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DCTN3O75935 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DCTN3O75935 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DCTN3O75935 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DCTN3O75935 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DCTN3O75935 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DCTN3O75935 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.6■□□□□ 0.57
DCTN3O75935 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.6■□□□□ 0.57
DCTN3O75935 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.6■□□□□ 0.57
DCTN3O75935 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
DCTN3O75935 UBE2DNL-204ENST00000602536 740 ntBASIC18.6■□□□□ 0.57
DCTN3O75935 MYCNOS-205ENST00000641950 531 ntBASIC18.6■□□□□ 0.57
DCTN3O75935 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
DCTN3O75935 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DCTN3O75935 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms