Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.26■□□□□ 0.51
SLC28A2O43868 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC28A2O43868 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC28A2O43868 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC28A2O43868 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC28A2O43868 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC28A2O43868 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC28A2O43868 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC28A2O43868 AL031133.1-201ENST00000406807 723 ntBASIC18.26■□□□□ 0.51
SLC28A2O43868 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.26■□□□□ 0.51
SLC28A2O43868 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC28A2O43868 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC28A2O43868 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.26■□□□□ 0.51
SLC28A2O43868 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.26■□□□□ 0.51
SLC28A2O43868 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.26■□□□□ 0.51
SLC28A2O43868 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.26■□□□□ 0.51
SLC28A2O43868 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.26■□□□□ 0.51
SLC28A2O43868 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SLC28A2O43868 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC28A2O43868 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC28A2O43868 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC28A2O43868 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC28A2O43868 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SLC28A2O43868 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SLC28A2O43868 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
SLC28A2O43868 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC28A2O43868 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC28A2O43868 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC28A2O43868 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC28A2O43868 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC28A2O43868 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
SLC28A2O43868 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC28A2O43868 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC28A2O43868 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC28A2O43868 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC28A2O43868 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC28A2O43868 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SLC28A2O43868 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.25■□□□□ 0.51
SLC28A2O43868 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC28A2O43868 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.25■□□□□ 0.51
SLC28A2O43868 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC28A2O43868 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.25■□□□□ 0.51
SLC28A2O43868 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.25■□□□□ 0.51
SLC28A2O43868 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.25■□□□□ 0.51
SLC28A2O43868 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC28A2O43868 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC28A2O43868 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC28A2O43868 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC28A2O43868 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC28A2O43868 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC28A2O43868 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC28A2O43868 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC28A2O43868 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC28A2O43868 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC28A2O43868 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC28A2O43868 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC28A2O43868 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC28A2O43868 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.24■□□□□ 0.51
SLC28A2O43868 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SLC28A2O43868 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SLC28A2O43868 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC28A2O43868 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC28A2O43868 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC28A2O43868 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC28A2O43868 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.24■□□□□ 0.51
SLC28A2O43868 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SLC28A2O43868 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC28A2O43868 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC28A2O43868 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SLC28A2O43868 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC28A2O43868 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC28A2O43868 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC28A2O43868 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC28A2O43868 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC28A2O43868 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC28A2O43868 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SLC28A2O43868 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC28A2O43868 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC28A2O43868 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC28A2O43868 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SLC28A2O43868 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC28A2O43868 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC28A2O43868 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC28A2O43868 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC28A2O43868 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC28A2O43868 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC28A2O43868 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC28A2O43868 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC28A2O43868 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC28A2O43868 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC28A2O43868 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.23■□□□□ 0.51
SLC28A2O43868 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC28A2O43868 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC28A2O43868 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC28A2O43868 AC020763.4-201ENST00000623414 4170 ntBASIC18.23■□□□□ 0.51
SLC28A2O43868 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC28A2O43868 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC28A2O43868 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC28A2O43868 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.23■□□□□ 0.51
SLC28A2O43868 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms