Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TSPAN4O14817 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TSPAN4O14817 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TSPAN4O14817 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.92■□□□□ 0.14
TSPAN4O14817 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TSPAN4O14817 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TSPAN4O14817 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TSPAN4O14817 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TSPAN4O14817 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TSPAN4O14817 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TSPAN4O14817 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
TSPAN4O14817 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.92■□□□□ 0.14
TSPAN4O14817 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TSPAN4O14817 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TSPAN4O14817 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TSPAN4O14817 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TSPAN4O14817 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TSPAN4O14817 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TSPAN4O14817 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TSPAN4O14817 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TSPAN4O14817 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TSPAN4O14817 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TSPAN4O14817 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TSPAN4O14817 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.91■□□□□ 0.14
TSPAN4O14817 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.91■□□□□ 0.14
TSPAN4O14817 AC138907.5-202ENST00000569484 235 ntBASIC15.91■□□□□ 0.14
TSPAN4O14817 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TSPAN4O14817 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TSPAN4O14817 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TSPAN4O14817 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TSPAN4O14817 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TSPAN4O14817 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TSPAN4O14817 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.91■□□□□ 0.14
TSPAN4O14817 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.91■□□□□ 0.14
TSPAN4O14817 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TSPAN4O14817 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TSPAN4O14817 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TSPAN4O14817 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TSPAN4O14817 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.91■□□□□ 0.14
TSPAN4O14817 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TSPAN4O14817 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TSPAN4O14817 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TSPAN4O14817 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TSPAN4O14817 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
TSPAN4O14817 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.9■□□□□ 0.14
TSPAN4O14817 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TSPAN4O14817 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TSPAN4O14817 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TSPAN4O14817 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TSPAN4O14817 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TSPAN4O14817 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.9■□□□□ 0.14
TSPAN4O14817 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TSPAN4O14817 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.9■□□□□ 0.14
TSPAN4O14817 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.9■□□□□ 0.14
TSPAN4O14817 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.9■□□□□ 0.14
TSPAN4O14817 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TSPAN4O14817 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC15.9■□□□□ 0.14
TSPAN4O14817 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TSPAN4O14817 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TSPAN4O14817 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TSPAN4O14817 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TSPAN4O14817 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TSPAN4O14817 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TSPAN4O14817 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.9■□□□□ 0.14
TSPAN4O14817 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TSPAN4O14817 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TSPAN4O14817 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.89■□□□□ 0.13
TSPAN4O14817 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TSPAN4O14817 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TSPAN4O14817 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TSPAN4O14817 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
TSPAN4O14817 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TSPAN4O14817 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.89■□□□□ 0.13
TSPAN4O14817 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TSPAN4O14817 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TSPAN4O14817 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TSPAN4O14817 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.89■□□□□ 0.13
TSPAN4O14817 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.89■□□□□ 0.13
TSPAN4O14817 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.89■□□□□ 0.13
TSPAN4O14817 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.89■□□□□ 0.13
TSPAN4O14817 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TSPAN4O14817 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TSPAN4O14817 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.89■□□□□ 0.13
TSPAN4O14817 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.89■□□□□ 0.13
TSPAN4O14817 AC104187.1-201ENST00000607510 612 ntBASIC15.89■□□□□ 0.13
TSPAN4O14817 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.89■□□□□ 0.13
TSPAN4O14817 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TSPAN4O14817 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TSPAN4O14817 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TSPAN4O14817 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TSPAN4O14817 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TSPAN4O14817 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TSPAN4O14817 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TSPAN4O14817 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TSPAN4O14817 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TSPAN4O14817 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TSPAN4O14817 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TSPAN4O14817 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TSPAN4O14817 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TSPAN4O14817 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms