Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLE3Q9NRF9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.65■□□□□ 0.42
POLE3Q9NRF9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
POLE3Q9NRF9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
POLE3Q9NRF9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
POLE3Q9NRF9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.64■□□□□ 0.42
POLE3Q9NRF9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.64■□□□□ 0.42
POLE3Q9NRF9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
POLE3Q9NRF9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.64■□□□□ 0.42
POLE3Q9NRF9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
POLE3Q9NRF9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 AL049812.1-201ENST00000432563 2267 ntBASIC17.64■□□□□ 0.41
POLE3Q9NRF9 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 RPPH1-201ENST00000516869 333 ntBASIC17.64■□□□□ 0.41
POLE3Q9NRF9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 RARRES2P10-201ENST00000564312 460 ntBASIC17.64■□□□□ 0.41
POLE3Q9NRF9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
POLE3Q9NRF9 AC006333.2-201ENST00000607957 2099 ntBASIC17.63■□□□□ 0.41
POLE3Q9NRF9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 ITM2C-210ENST00000620962 501 ntBASIC17.63■□□□□ 0.41
POLE3Q9NRF9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLE3Q9NRF9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 AC093525.10-201ENST00000625130 1569 ntBASIC17.62■□□□□ 0.41
POLE3Q9NRF9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 AC004980.1-204ENST00000429707 299 ntBASIC17.62■□□□□ 0.41
POLE3Q9NRF9 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.62■□□□□ 0.41
POLE3Q9NRF9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 PRSS44-201ENST00000515154 1146 ntBASIC17.62■□□□□ 0.41
POLE3Q9NRF9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 AC026271.3-201ENST00000571884 352 ntBASIC17.62■□□□□ 0.41
POLE3Q9NRF9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.62■□□□□ 0.41
POLE3Q9NRF9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
POLE3Q9NRF9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms