Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CLK4Q9HAZ1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 AL390961.4-201ENST00000623958 2535 ntBASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 AL032819.2-201ENST00000624543 2162 ntBASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 HTR7P1-201ENST00000538670 1336 ntBASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLK4Q9HAZ1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms