Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 ECEL1P2-201ENST00000461596 1295 ntBASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 SLC9A7P1-201ENST00000554295 3311 ntBASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 AC106886.4-201ENST00000623557 2502 ntBASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 AC104640.1-201ENST00000562617 2109 ntBASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 AL162741.1-201ENST00000565563 1558 ntBASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC11.05□□□□□ -0.64
CYSTM1Q9H1C7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 AL009178.2-201ENST00000597278 2719 ntBASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 OR7E47P-201ENST00000546390 1422 ntBASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 AC092171.3-201ENST00000610122 2651 ntBASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 AC079781.5-202ENST00000641784 3743 ntBASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CYSTM1Q9H1C7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CYSTM1Q9H1C7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC11.03□□□□□ -0.64
CYSTM1Q9H1C7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CYSTM1Q9H1C7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms