Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 AC008175.2-201ENST00000612840 297 ntBASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COX4I2Q96KJ9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COX4I2Q96KJ9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.58■□□□□ 0.41
COX4I2Q96KJ9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COX4I2Q96KJ9 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
COX4I2Q96KJ9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
COX4I2Q96KJ9 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COX4I2Q96KJ9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COX4I2Q96KJ9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
COX4I2Q96KJ9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COX4I2Q96KJ9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COX4I2Q96KJ9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
COX4I2Q96KJ9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
COX4I2Q96KJ9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COX4I2Q96KJ9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.58■□□□□ 0.4
COX4I2Q96KJ9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COX4I2Q96KJ9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.58■□□□□ 0.4
COX4I2Q96KJ9 AC010331.1-201ENST00000611423 582 ntBASIC17.58■□□□□ 0.4
COX4I2Q96KJ9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.58■□□□□ 0.4
COX4I2Q96KJ9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COX4I2Q96KJ9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COX4I2Q96KJ9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
COX4I2Q96KJ9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
COX4I2Q96KJ9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
COX4I2Q96KJ9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
COX4I2Q96KJ9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COX4I2Q96KJ9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.58■□□□□ 0.4
COX4I2Q96KJ9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
COX4I2Q96KJ9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COX4I2Q96KJ9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
COX4I2Q96KJ9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.58■□□□□ 0.4
COX4I2Q96KJ9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COX4I2Q96KJ9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COX4I2Q96KJ9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.56■□□□□ 0.4
COX4I2Q96KJ9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COX4I2Q96KJ9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
COX4I2Q96KJ9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COX4I2Q96KJ9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COX4I2Q96KJ9 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.56■□□□□ 0.4
COX4I2Q96KJ9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COX4I2Q96KJ9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms