Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 AC131212.4-201ENST00000623606 975 ntBASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC22.27■■□□□ 1.15
SMARCC2Q8TAQ2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC22.27■■□□□ 1.15
SMARCC2Q8TAQ2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC22.27■■□□□ 1.15
SMARCC2Q8TAQ2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SMARCC2Q8TAQ2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 REXO1L10P-201ENST00000615707 1290 ntBASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 REXO1L12P-201ENST00000622156 912 ntBASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMARCC2Q8TAQ2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC2Q8TAQ2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC22.25■■□□□ 1.15
SMARCC2Q8TAQ2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC2Q8TAQ2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC22.25■■□□□ 1.15
SMARCC2Q8TAQ2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC2Q8TAQ2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC2Q8TAQ2 AC004980.1-204ENST00000429707 299 ntBASIC22.25■■□□□ 1.15
SMARCC2Q8TAQ2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC2Q8TAQ2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC2Q8TAQ2 BX088651.1-201ENST00000540551 451 ntBASIC22.25■■□□□ 1.15
SMARCC2Q8TAQ2 AC073912.3-201ENST00000624414 853 ntBASIC22.25■■□□□ 1.15
SMARCC2Q8TAQ2 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.25■■□□□ 1.15
SMARCC2Q8TAQ2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC2Q8TAQ2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC22.25■■□□□ 1.15
SMARCC2Q8TAQ2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC2Q8TAQ2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC22.25■■□□□ 1.15
SMARCC2Q8TAQ2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC2Q8TAQ2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC2Q8TAQ2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMARCC2Q8TAQ2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMARCC2Q8TAQ2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMARCC2Q8TAQ2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMARCC2Q8TAQ2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMARCC2Q8TAQ2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
SMARCC2Q8TAQ2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC22.24■■□□□ 1.15
SMARCC2Q8TAQ2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC22.24■■□□□ 1.15
SMARCC2Q8TAQ2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SMARCC2Q8TAQ2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.24■■□□□ 1.15
SMARCC2Q8TAQ2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC22.24■■□□□ 1.15
SMARCC2Q8TAQ2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SMARCC2Q8TAQ2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SMARCC2Q8TAQ2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.24■■□□□ 1.15
SMARCC2Q8TAQ2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC22.24■■□□□ 1.15
SMARCC2Q8TAQ2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC22.24■■□□□ 1.15
SMARCC2Q8TAQ2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
SMARCC2Q8TAQ2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMARCC2Q8TAQ2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMARCC2Q8TAQ2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMARCC2Q8TAQ2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMARCC2Q8TAQ2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMARCC2Q8TAQ2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMARCC2Q8TAQ2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
SMARCC2Q8TAQ2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
SMARCC2Q8TAQ2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
SMARCC2Q8TAQ2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
SMARCC2Q8TAQ2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMARCC2Q8TAQ2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SMARCC2Q8TAQ2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC22.23■■□□□ 1.15
SMARCC2Q8TAQ2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.23■■□□□ 1.15
SMARCC2Q8TAQ2 AC116562.2-201ENST00000507042 360 ntBASIC22.23■■□□□ 1.15
SMARCC2Q8TAQ2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22.23■■□□□ 1.15
SMARCC2Q8TAQ2 AC026271.3-201ENST00000571884 352 ntBASIC22.23■■□□□ 1.15
SMARCC2Q8TAQ2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC22.23■■□□□ 1.15
SMARCC2Q8TAQ2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMARCC2Q8TAQ2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC22.23■■□□□ 1.15
SMARCC2Q8TAQ2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.22■■□□□ 1.15
SMARCC2Q8TAQ2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMARCC2Q8TAQ2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC22.22■■□□□ 1.15
SMARCC2Q8TAQ2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
SMARCC2Q8TAQ2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms