Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF43Q68DV7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF43Q68DV7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RNF43Q68DV7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF43Q68DV7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF43Q68DV7 RCC2P6-201ENST00000526625 1557 ntBASIC19.92■□□□□ 0.78
RNF43Q68DV7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF43Q68DV7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF43Q68DV7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF43Q68DV7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF43Q68DV7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF43Q68DV7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF43Q68DV7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF43Q68DV7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF43Q68DV7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF43Q68DV7 MIR1238-201ENST00000408483 83 ntBASIC19.92■□□□□ 0.78
RNF43Q68DV7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.92■□□□□ 0.78
RNF43Q68DV7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF43Q68DV7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF43Q68DV7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.92■□□□□ 0.78
RNF43Q68DV7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RNF43Q68DV7 AC087388.1-201ENST00000571370 1112 ntBASIC19.92■□□□□ 0.78
RNF43Q68DV7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF43Q68DV7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF43Q68DV7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RNF43Q68DV7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF43Q68DV7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF43Q68DV7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF43Q68DV7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF43Q68DV7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF43Q68DV7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF43Q68DV7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF43Q68DV7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
RNF43Q68DV7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF43Q68DV7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF43Q68DV7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF43Q68DV7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF43Q68DV7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF43Q68DV7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF43Q68DV7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF43Q68DV7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF43Q68DV7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF43Q68DV7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF43Q68DV7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF43Q68DV7 AC008040.2-201ENST00000461049 708 ntBASIC19.91■□□□□ 0.78
RNF43Q68DV7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF43Q68DV7 NTF6B-201ENST00000591913 560 ntBASIC19.91■□□□□ 0.78
RNF43Q68DV7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF43Q68DV7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF43Q68DV7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF43Q68DV7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF43Q68DV7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF43Q68DV7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF43Q68DV7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF43Q68DV7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF43Q68DV7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF43Q68DV7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF43Q68DV7 TERF1P1-201ENST00000311003 1181 ntBASIC19.9■□□□□ 0.78
RNF43Q68DV7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF43Q68DV7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RNF43Q68DV7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
RNF43Q68DV7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF43Q68DV7 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF43Q68DV7 NAPSB-206ENST00000562112 1266 ntBASIC19.9■□□□□ 0.78
RNF43Q68DV7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF43Q68DV7 AP000692.2-201ENST00000608391 879 ntBASIC19.9■□□□□ 0.78
RNF43Q68DV7 KRT18P22-201ENST00000402024 1347 ntBASIC19.9■□□□□ 0.78
RNF43Q68DV7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF43Q68DV7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF43Q68DV7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF43Q68DV7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF43Q68DV7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RNF43Q68DV7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.9■□□□□ 0.78
RNF43Q68DV7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
RNF43Q68DV7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.89■□□□□ 0.78
RNF43Q68DV7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
RNF43Q68DV7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RNF43Q68DV7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RNF43Q68DV7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RNF43Q68DV7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RNF43Q68DV7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RNF43Q68DV7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF43Q68DV7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF43Q68DV7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RNF43Q68DV7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF43Q68DV7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF43Q68DV7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF43Q68DV7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF43Q68DV7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF43Q68DV7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF43Q68DV7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF43Q68DV7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF43Q68DV7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.89■□□□□ 0.77
RNF43Q68DV7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF43Q68DV7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RNF43Q68DV7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF43Q68DV7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF43Q68DV7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF43Q68DV7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF43Q68DV7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms