Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.16■□□□□ 0.66
PRAMEP78395 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.16■□□□□ 0.66
PRAMEP78395 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEP78395 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEP78395 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEP78395 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PRAMEP78395 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEP78395 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.16■□□□□ 0.66
PRAMEP78395 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PRAMEP78395 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEP78395 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEP78395 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEP78395 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEP78395 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PRAMEP78395 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
PRAMEP78395 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEP78395 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.15■□□□□ 0.66
PRAMEP78395 NIFKP9-201ENST00000419265 221 ntBASIC19.15■□□□□ 0.66
PRAMEP78395 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.15■□□□□ 0.66
PRAMEP78395 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.15■□□□□ 0.66
PRAMEP78395 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PRAMEP78395 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.15■□□□□ 0.66
PRAMEP78395 AL445675.2-201ENST00000620291 557 ntBASIC19.15■□□□□ 0.66
PRAMEP78395 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.15■□□□□ 0.66
PRAMEP78395 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEP78395 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.15■□□□□ 0.66
PRAMEP78395 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.15■□□□□ 0.66
PRAMEP78395 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEP78395 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEP78395 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEP78395 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.15■□□□□ 0.66
PRAMEP78395 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PRAMEP78395 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEP78395 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEP78395 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEP78395 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEP78395 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEP78395 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEP78395 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.15■□□□□ 0.66
PRAMEP78395 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEP78395 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.66
PRAMEP78395 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PRAMEP78395 FEM1AP3-201ENST00000403722 1741 ntBASIC19.14■□□□□ 0.66
PRAMEP78395 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PRAMEP78395 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEP78395 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.14■□□□□ 0.65
PRAMEP78395 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.14■□□□□ 0.65
PRAMEP78395 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEP78395 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PRAMEP78395 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEP78395 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.14■□□□□ 0.65
PRAMEP78395 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.14■□□□□ 0.65
PRAMEP78395 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.14■□□□□ 0.65
PRAMEP78395 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.14■□□□□ 0.65
PRAMEP78395 AL359736.2-201ENST00000621992 437 ntBASIC19.14■□□□□ 0.65
PRAMEP78395 AC131212.4-201ENST00000623606 975 ntBASIC19.14■□□□□ 0.65
PRAMEP78395 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEP78395 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PRAMEP78395 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.14■□□□□ 0.65
PRAMEP78395 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEP78395 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEP78395 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.13■□□□□ 0.65
PRAMEP78395 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEP78395 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEP78395 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEP78395 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEP78395 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.13■□□□□ 0.65
PRAMEP78395 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEP78395 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
PRAMEP78395 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEP78395 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.13■□□□□ 0.65
PRAMEP78395 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEP78395 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEP78395 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEP78395 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
PRAMEP78395 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEP78395 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEP78395 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.13■□□□□ 0.65
PRAMEP78395 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PRAMEP78395 AL353708.3-201ENST00000610272 989 ntBASIC19.13■□□□□ 0.65
PRAMEP78395 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEP78395 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEP78395 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEP78395 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEP78395 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEP78395 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEP78395 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEP78395 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
PRAMEP78395 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
PRAMEP78395 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEP78395 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEP78395 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.12■□□□□ 0.65
PRAMEP78395 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.12■□□□□ 0.65
PRAMEP78395 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEP78395 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.12■□□□□ 0.65
PRAMEP78395 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEP78395 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEP78395 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEP78395 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.12■□□□□ 0.65
PRAMEP78395 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms