Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SUPT4H1P63272 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SUPT4H1P63272 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SUPT4H1P63272 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SUPT4H1P63272 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SUPT4H1P63272 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SUPT4H1P63272 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SUPT4H1P63272 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.67■□□□□ 0.1
SUPT4H1P63272 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.67■□□□□ 0.1
SUPT4H1P63272 AC008694.1-202ENST00000636953 945 ntBASIC15.67■□□□□ 0.1
SUPT4H1P63272 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
SUPT4H1P63272 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SUPT4H1P63272 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.67■□□□□ 0.1
SUPT4H1P63272 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SUPT4H1P63272 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SUPT4H1P63272 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SUPT4H1P63272 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SUPT4H1P63272 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SUPT4H1P63272 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SUPT4H1P63272 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SUPT4H1P63272 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.67■□□□□ 0.1
SUPT4H1P63272 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.67■□□□□ 0.1
SUPT4H1P63272 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SUPT4H1P63272 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SUPT4H1P63272 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SUPT4H1P63272 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SUPT4H1P63272 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SUPT4H1P63272 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SUPT4H1P63272 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SUPT4H1P63272 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SUPT4H1P63272 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SUPT4H1P63272 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SUPT4H1P63272 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SUPT4H1P63272 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.66■□□□□ 0.1
SUPT4H1P63272 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SUPT4H1P63272 AC134043.2-201ENST00000624206 2238 ntBASIC15.66■□□□□ 0.1
SUPT4H1P63272 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SUPT4H1P63272 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.66■□□□□ 0.1
SUPT4H1P63272 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.66■□□□□ 0.1
SUPT4H1P63272 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SUPT4H1P63272 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SUPT4H1P63272 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.66■□□□□ 0.1
SUPT4H1P63272 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.66■□□□□ 0.1
SUPT4H1P63272 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SUPT4H1P63272 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SUPT4H1P63272 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SUPT4H1P63272 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SUPT4H1P63272 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SUPT4H1P63272 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.66■□□□□ 0.1
SUPT4H1P63272 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SUPT4H1P63272 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SUPT4H1P63272 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SUPT4H1P63272 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SUPT4H1P63272 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SUPT4H1P63272 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.66■□□□□ 0.1
SUPT4H1P63272 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SUPT4H1P63272 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SUPT4H1P63272 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SUPT4H1P63272 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SUPT4H1P63272 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SUPT4H1P63272 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.65■□□□□ 0.1
SUPT4H1P63272 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SUPT4H1P63272 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SUPT4H1P63272 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.65■□□□□ 0.1
SUPT4H1P63272 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SUPT4H1P63272 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SUPT4H1P63272 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.65■□□□□ 0.1
SUPT4H1P63272 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.65■□□□□ 0.1
SUPT4H1P63272 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SUPT4H1P63272 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SUPT4H1P63272 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SUPT4H1P63272 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
SUPT4H1P63272 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SUPT4H1P63272 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.65■□□□□ 0.1
SUPT4H1P63272 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.65■□□□□ 0.1
SUPT4H1P63272 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.65■□□□□ 0.1
SUPT4H1P63272 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.65■□□□□ 0.1
SUPT4H1P63272 AC073210.2-201ENST00000430369 194 ntBASIC15.65■□□□□ 0.1
SUPT4H1P63272 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.65■□□□□ 0.1
SUPT4H1P63272 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SUPT4H1P63272 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.65■□□□□ 0.1
SUPT4H1P63272 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.65■□□□□ 0.1
SUPT4H1P63272 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SUPT4H1P63272 OR10C1-204ENST00000622521 1039 ntBASIC15.65■□□□□ 0.1
SUPT4H1P63272 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.65■□□□□ 0.1
SUPT4H1P63272 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SUPT4H1P63272 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SUPT4H1P63272 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SUPT4H1P63272 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SUPT4H1P63272 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SUPT4H1P63272 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SUPT4H1P63272 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.65■□□□□ 0.1
SUPT4H1P63272 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
SUPT4H1P63272 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SUPT4H1P63272 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.65■□□□□ 0.1
SUPT4H1P63272 PRORSD1P-202ENST00000563365 2154 ntBASIC15.65■□□□□ 0.1
SUPT4H1P63272 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.65■□□□□ 0.1
SUPT4H1P63272 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SUPT4H1P63272 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SUPT4H1P63272 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms