Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC011506.1-201ENST00000474329 610 ntBASIC19.7■□□□□ 0.74
CD48P09326 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CD48P09326 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CD48P09326 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.7■□□□□ 0.74
CD48P09326 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.7■□□□□ 0.74
CD48P09326 AC073195.1-201ENST00000607241 877 ntBASIC19.7■□□□□ 0.74
CD48P09326 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.7■□□□□ 0.74
CD48P09326 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.7■□□□□ 0.74
CD48P09326 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CD48P09326 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD48P09326 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD48P09326 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD48P09326 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD48P09326 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD48P09326 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CD48P09326 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CD48P09326 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD48P09326 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.69■□□□□ 0.74
CD48P09326 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.69■□□□□ 0.74
CD48P09326 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD48P09326 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.69■□□□□ 0.74
CD48P09326 FAM197Y1-201ENST00000421178 764 ntBASIC19.69■□□□□ 0.74
CD48P09326 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CD48P09326 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
CD48P09326 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CD48P09326 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
CD48P09326 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD48P09326 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.69■□□□□ 0.74
CD48P09326 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD48P09326 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD48P09326 AC093525.10-201ENST00000625130 1569 ntBASIC19.69■□□□□ 0.74
CD48P09326 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CD48P09326 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CD48P09326 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD48P09326 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CD48P09326 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.68■□□□□ 0.74
CD48P09326 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD48P09326 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.68■□□□□ 0.74
CD48P09326 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.68■□□□□ 0.74
CD48P09326 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.68■□□□□ 0.74
CD48P09326 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD48P09326 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CD48P09326 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD48P09326 NEFHP1-201ENST00000412845 2629 ntBASIC19.68■□□□□ 0.74
CD48P09326 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CD48P09326 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CD48P09326 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CD48P09326 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.68■□□□□ 0.74
CD48P09326 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD48P09326 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.68■□□□□ 0.74
CD48P09326 MESTP1-201ENST00000404287 994 ntBASIC19.68■□□□□ 0.74
CD48P09326 AC004951.3-201ENST00000418645 1148 ntBASIC19.68■□□□□ 0.74
CD48P09326 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CD48P09326 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CD48P09326 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.68■□□□□ 0.74
CD48P09326 AL031985.4-201ENST00000642138 673 ntBASIC19.68■□□□□ 0.74
CD48P09326 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD48P09326 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.68■□□□□ 0.74
CD48P09326 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD48P09326 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD48P09326 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.68■□□□□ 0.74
CD48P09326 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD48P09326 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD48P09326 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.68■□□□□ 0.74
CD48P09326 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD48P09326 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CD48P09326 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.68■□□□□ 0.74
CD48P09326 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.68■□□□□ 0.74
CD48P09326 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD48P09326 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.67■□□□□ 0.74
CD48P09326 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CD48P09326 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CD48P09326 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD48P09326 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD48P09326 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD48P09326 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CD48P09326 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.67■□□□□ 0.74
CD48P09326 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.67■□□□□ 0.74
CD48P09326 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD48P09326 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.67■□□□□ 0.74
CD48P09326 AC011298.2-201ENST00000617989 482 ntBASIC19.67■□□□□ 0.74
CD48P09326 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD48P09326 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.67■□□□□ 0.74
CD48P09326 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CD48P09326 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CD48P09326 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
CD48P09326 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD48P09326 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CD48P09326 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.67■□□□□ 0.74
CD48P09326 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CD48P09326 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
CD48P09326 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CD48P09326 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD48P09326 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.67■□□□□ 0.74
CD48P09326 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.67■□□□□ 0.74
CD48P09326 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CD48P09326 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.67■□□□□ 0.74
CD48P09326 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CD48P09326 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CD48P09326 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms