Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 MIR718-201ENST00000390190 70 ntBASIC16.95■□□□□ 0.3
TRAF3IP2O43734 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 FAM207BP-201ENST00000447172 505 ntBASIC16.95■□□□□ 0.3
TRAF3IP2O43734 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 AC006333.2-201ENST00000607957 2099 ntBASIC16.95■□□□□ 0.3
TRAF3IP2O43734 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 AP000692.2-201ENST00000608391 879 ntBASIC16.94■□□□□ 0.3
TRAF3IP2O43734 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP2O43734 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 CKBP1-201ENST00000565489 1086 ntBASIC16.93■□□□□ 0.3
TRAF3IP2O43734 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 AC026471.5-201ENST00000615068 467 ntBASIC16.93■□□□□ 0.3
TRAF3IP2O43734 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 AP006294.2-201ENST00000641667 209 ntBASIC16.93■□□□□ 0.3
TRAF3IP2O43734 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.93■□□□□ 0.3
TRAF3IP2O43734 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP2O43734 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP2O43734 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP2O43734 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRAF3IP2O43734 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP2O43734 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRAF3IP2O43734 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
TRAF3IP2O43734 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAF3IP2O43734 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.92■□□□□ 0.3
TRAF3IP2O43734 DGCR10-201ENST00000609839 495 ntBASIC16.92■□□□□ 0.3
TRAF3IP2O43734 REXO1L10P-201ENST00000615707 1290 ntBASIC16.92■□□□□ 0.3
TRAF3IP2O43734 REXO1L12P-201ENST00000622156 912 ntBASIC16.92■□□□□ 0.3
TRAF3IP2O43734 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAF3IP2O43734 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAF3IP2O43734 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP2O43734 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP2O43734 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRAF3IP2O43734 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRAF3IP2O43734 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAF3IP2O43734 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP2O43734 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP2O43734 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAF3IP2O43734 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms