Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.21■□□□□ 0.67
SMAD6O43541 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.21■□□□□ 0.67
SMAD6O43541 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
SMAD6O43541 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD6O43541 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD6O43541 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.21■□□□□ 0.67
SMAD6O43541 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.21■□□□□ 0.67
SMAD6O43541 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.21■□□□□ 0.67
SMAD6O43541 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD6O43541 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD6O43541 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD6O43541 GPAT2P1-201ENST00000444924 1672 ntBASIC19.2■□□□□ 0.66
SMAD6O43541 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD6O43541 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD6O43541 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD6O43541 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.2■□□□□ 0.66
SMAD6O43541 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD6O43541 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.2■□□□□ 0.66
SMAD6O43541 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD6O43541 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.2■□□□□ 0.66
SMAD6O43541 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SMAD6O43541 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.2■□□□□ 0.66
SMAD6O43541 KRT8P3-201ENST00000519669 1449 ntBASIC19.2■□□□□ 0.66
SMAD6O43541 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD6O43541 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD6O43541 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.2■□□□□ 0.66
SMAD6O43541 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.2■□□□□ 0.66
SMAD6O43541 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD6O43541 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD6O43541 FP475955.4-201ENST00000623131 1990 ntBASIC19.2■□□□□ 0.66
SMAD6O43541 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SMAD6O43541 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD6O43541 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SMAD6O43541 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.19■□□□□ 0.66
SMAD6O43541 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD6O43541 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD6O43541 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD6O43541 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD6O43541 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SMAD6O43541 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD6O43541 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.19■□□□□ 0.66
SMAD6O43541 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD6O43541 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD6O43541 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD6O43541 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD6O43541 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD6O43541 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
SMAD6O43541 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD6O43541 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD6O43541 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SMAD6O43541 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SMAD6O43541 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.19■□□□□ 0.66
SMAD6O43541 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.19■□□□□ 0.66
SMAD6O43541 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD6O43541 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.19■□□□□ 0.66
SMAD6O43541 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD6O43541 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
SMAD6O43541 AC141257.4-201ENST00000634557 245 ntBASIC19.19■□□□□ 0.66
SMAD6O43541 AC136944.6-201ENST00000634818 245 ntBASIC19.19■□□□□ 0.66
SMAD6O43541 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD6O43541 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.19■□□□□ 0.66
SMAD6O43541 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SMAD6O43541 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD6O43541 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.19■□□□□ 0.66
SMAD6O43541 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD6O43541 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD6O43541 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.19■□□□□ 0.66
SMAD6O43541 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD6O43541 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD6O43541 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD6O43541 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.19■□□□□ 0.66
SMAD6O43541 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD6O43541 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SMAD6O43541 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD6O43541 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD6O43541 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD6O43541 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD6O43541 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD6O43541 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD6O43541 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD6O43541 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD6O43541 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.18■□□□□ 0.66
SMAD6O43541 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.18■□□□□ 0.66
SMAD6O43541 BX664615.1-201ENST00000443558 458 ntBASIC19.18■□□□□ 0.66
SMAD6O43541 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD6O43541 AC139887.4-201ENST00000607877 719 ntBASIC19.18■□□□□ 0.66
SMAD6O43541 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD6O43541 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.18■□□□□ 0.66
SMAD6O43541 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD6O43541 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD6O43541 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD6O43541 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.18■□□□□ 0.66
SMAD6O43541 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD6O43541 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.17■□□□□ 0.66
SMAD6O43541 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD6O43541 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SMAD6O43541 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.17■□□□□ 0.66
SMAD6O43541 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD6O43541 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD6O43541 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms