Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PCDHGA11Q9Y5H2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA11Q9Y5H2 TSPY21P-201ENST00000433481 731 ntBASIC18.46■□□□□ 0.55
PCDHGA11Q9Y5H2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGA11Q9Y5H2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA11Q9Y5H2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGA11Q9Y5H2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDHGA11Q9Y5H2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHGA11Q9Y5H2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA11Q9Y5H2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA11Q9Y5H2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA11Q9Y5H2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PCDHGA11Q9Y5H2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.46■□□□□ 0.55
PCDHGA11Q9Y5H2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA11Q9Y5H2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA11Q9Y5H2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PCDHGA11Q9Y5H2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
PCDHGA11Q9Y5H2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA11Q9Y5H2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.46■□□□□ 0.54
PCDHGA11Q9Y5H2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 FAM201B-201ENST00000458407 597 ntBASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 AC007613.1-201ENST00000572811 2597 ntBASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA11Q9Y5H2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 IRX1P1-201ENST00000438849 1838 ntBASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 FEM1AP3-201ENST00000403722 1741 ntBASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 C1QBPP2-201ENST00000528754 825 ntBASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA11Q9Y5H2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGA11Q9Y5H2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHGA11Q9Y5H2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA11Q9Y5H2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA11Q9Y5H2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA11Q9Y5H2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA11Q9Y5H2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA11Q9Y5H2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
PCDHGA11Q9Y5H2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGA11Q9Y5H2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDHGA11Q9Y5H2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHGA11Q9Y5H2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDHGA11Q9Y5H2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PCDHGA11Q9Y5H2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PCDHGA11Q9Y5H2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA11Q9Y5H2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA11Q9Y5H2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA11Q9Y5H2 AL049812.1-201ENST00000432563 2267 ntBASIC18.43■□□□□ 0.54
PCDHGA11Q9Y5H2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA11Q9Y5H2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA11Q9Y5H2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PCDHGA11Q9Y5H2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms