Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 AL020996.1-203ENST00000536896 2307 ntBASIC16.8■□□□□ 0.28
RTTNQ86VV8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTTNQ86VV8 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTTNQ86VV8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTTNQ86VV8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.8■□□□□ 0.28
RTTNQ86VV8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.8■□□□□ 0.28
RTTNQ86VV8 Z85996.1-201ENST00000494644 937 ntBASIC16.8■□□□□ 0.28
RTTNQ86VV8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.8■□□□□ 0.28
RTTNQ86VV8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.8■□□□□ 0.28
RTTNQ86VV8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTTNQ86VV8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.8■□□□□ 0.28
RTTNQ86VV8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.8■□□□□ 0.28
RTTNQ86VV8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RTTNQ86VV8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
RTTNQ86VV8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.79■□□□□ 0.28
RTTNQ86VV8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
RTTNQ86VV8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.79■□□□□ 0.28
RTTNQ86VV8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.79■□□□□ 0.28
RTTNQ86VV8 AL590326.2-201ENST00000625139 305 ntBASIC16.79■□□□□ 0.28
RTTNQ86VV8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RTTNQ86VV8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
RTTNQ86VV8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RTTNQ86VV8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.79■□□□□ 0.28
RTTNQ86VV8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.79■□□□□ 0.28
RTTNQ86VV8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTTNQ86VV8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.78■□□□□ 0.28
RTTNQ86VV8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.78■□□□□ 0.28
RTTNQ86VV8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
RTTNQ86VV8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTTNQ86VV8 NIFKP9-201ENST00000419265 221 ntBASIC16.78■□□□□ 0.28
RTTNQ86VV8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTTNQ86VV8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTTNQ86VV8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
RTTNQ86VV8 KRT8P41-201ENST00000533985 1514 ntBASIC16.78■□□□□ 0.28
RTTNQ86VV8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTTNQ86VV8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.78■□□□□ 0.28
RTTNQ86VV8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTTNQ86VV8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTTNQ86VV8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.78■□□□□ 0.28
RTTNQ86VV8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.78■□□□□ 0.28
RTTNQ86VV8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTTNQ86VV8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RTTNQ86VV8 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTTNQ86VV8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.78■□□□□ 0.28
RTTNQ86VV8 AC116562.2-201ENST00000507042 360 ntBASIC16.78■□□□□ 0.28
RTTNQ86VV8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.78■□□□□ 0.28
RTTNQ86VV8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.78■□□□□ 0.28
RTTNQ86VV8 AC073195.1-201ENST00000607241 877 ntBASIC16.78■□□□□ 0.28
RTTNQ86VV8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RTTNQ86VV8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTTNQ86VV8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RTTNQ86VV8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
RTTNQ86VV8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTTNQ86VV8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTTNQ86VV8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RTTNQ86VV8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTTNQ86VV8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTTNQ86VV8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTTNQ86VV8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.78■□□□□ 0.28
RTTNQ86VV8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTTNQ86VV8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTTNQ86VV8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTTNQ86VV8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.77■□□□□ 0.28
RTTNQ86VV8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTTNQ86VV8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.77■□□□□ 0.28
RTTNQ86VV8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTTNQ86VV8 AC093503.3-201ENST00000624917 2352 ntBASIC16.77■□□□□ 0.28
RTTNQ86VV8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RTTNQ86VV8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.77■□□□□ 0.28
RTTNQ86VV8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTTNQ86VV8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.77■□□□□ 0.28
RTTNQ86VV8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTTNQ86VV8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTTNQ86VV8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RTTNQ86VV8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
RTTNQ86VV8 TEX21P-204ENST00000641479 1693 ntBASIC16.77■□□□□ 0.27
RTTNQ86VV8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms