Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEC61A1P61619 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.64■□□□□ 0.25
SEC61A1P61619 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.64■□□□□ 0.25
SEC61A1P61619 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SEC61A1P61619 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEC61A1P61619 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEC61A1P61619 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SEC61A1P61619 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.64■□□□□ 0.25
SEC61A1P61619 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.64■□□□□ 0.25
SEC61A1P61619 MTDHP1-201ENST00000605323 784 ntBASIC16.64■□□□□ 0.25
SEC61A1P61619 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.64■□□□□ 0.25
SEC61A1P61619 AL023875.1-201ENST00000640777 796 ntBASIC16.64■□□□□ 0.25
SEC61A1P61619 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEC61A1P61619 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.64■□□□□ 0.25
SEC61A1P61619 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.64■□□□□ 0.25
SEC61A1P61619 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SEC61A1P61619 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SEC61A1P61619 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEC61A1P61619 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEC61A1P61619 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SEC61A1P61619 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SEC61A1P61619 NOC2LP1-202ENST00000452600 2235 ntBASIC16.64■□□□□ 0.25
SEC61A1P61619 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SEC61A1P61619 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.63■□□□□ 0.25
SEC61A1P61619 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
SEC61A1P61619 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.63■□□□□ 0.25
SEC61A1P61619 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.63■□□□□ 0.25
SEC61A1P61619 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SEC61A1P61619 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
SEC61A1P61619 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.63■□□□□ 0.25
SEC61A1P61619 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEC61A1P61619 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEC61A1P61619 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEC61A1P61619 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
SEC61A1P61619 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEC61A1P61619 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.63■□□□□ 0.25
SEC61A1P61619 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SEC61A1P61619 AC009113.1-201ENST00000570267 2443 ntBASIC16.63■□□□□ 0.25
SEC61A1P61619 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEC61A1P61619 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SEC61A1P61619 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SEC61A1P61619 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.63■□□□□ 0.25
SEC61A1P61619 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
SEC61A1P61619 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.63■□□□□ 0.25
SEC61A1P61619 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
SEC61A1P61619 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.63■□□□□ 0.25
SEC61A1P61619 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SEC61A1P61619 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.63■□□□□ 0.25
SEC61A1P61619 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEC61A1P61619 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEC61A1P61619 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SEC61A1P61619 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEC61A1P61619 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
SEC61A1P61619 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SEC61A1P61619 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEC61A1P61619 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SEC61A1P61619 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEC61A1P61619 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.63■□□□□ 0.25
SEC61A1P61619 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEC61A1P61619 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEC61A1P61619 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61A1P61619 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61A1P61619 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.62■□□□□ 0.25
SEC61A1P61619 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61A1P61619 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.62■□□□□ 0.25
SEC61A1P61619 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.62■□□□□ 0.25
SEC61A1P61619 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.62■□□□□ 0.25
SEC61A1P61619 HTR7P1-202ENST00000624664 4411 ntBASIC16.62■□□□□ 0.25
SEC61A1P61619 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61A1P61619 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SEC61A1P61619 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61A1P61619 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61A1P61619 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61A1P61619 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.62■□□□□ 0.25
SEC61A1P61619 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61A1P61619 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.62■□□□□ 0.25
SEC61A1P61619 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61A1P61619 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SEC61A1P61619 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.62■□□□□ 0.25
SEC61A1P61619 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.62■□□□□ 0.25
SEC61A1P61619 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61A1P61619 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61A1P61619 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.62■□□□□ 0.25
SEC61A1P61619 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.62■□□□□ 0.25
SEC61A1P61619 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61A1P61619 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61A1P61619 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61A1P61619 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61A1P61619 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.62■□□□□ 0.25
SEC61A1P61619 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61A1P61619 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61A1P61619 CROCCP3-202ENST00000420820 1947 ntBASIC16.62■□□□□ 0.25
SEC61A1P61619 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61A1P61619 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.62■□□□□ 0.25
SEC61A1P61619 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.62■□□□□ 0.25
SEC61A1P61619 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61A1P61619 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.62■□□□□ 0.25
SEC61A1P61619 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.62■□□□□ 0.25
SEC61A1P61619 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61A1P61619 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms