Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.72■□□□□ 0.43
GABRA3P34903 AC107956.1-201ENST00000494359 873 ntBASIC17.72■□□□□ 0.43
GABRA3P34903 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.72■□□□□ 0.43
GABRA3P34903 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
GABRA3P34903 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GABRA3P34903 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABRA3P34903 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.72■□□□□ 0.43
GABRA3P34903 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABRA3P34903 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABRA3P34903 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.72■□□□□ 0.43
GABRA3P34903 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GABRA3P34903 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.72■□□□□ 0.43
GABRA3P34903 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABRA3P34903 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABRA3P34903 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABRA3P34903 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
GABRA3P34903 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA3P34903 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.71■□□□□ 0.43
GABRA3P34903 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA3P34903 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA3P34903 RCC2P6-201ENST00000526625 1557 ntBASIC17.71■□□□□ 0.43
GABRA3P34903 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA3P34903 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA3P34903 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
GABRA3P34903 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA3P34903 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.71■□□□□ 0.43
GABRA3P34903 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.71■□□□□ 0.43
GABRA3P34903 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA3P34903 AC004951.3-201ENST00000418645 1148 ntBASIC17.71■□□□□ 0.43
GABRA3P34903 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA3P34903 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.71■□□□□ 0.43
GABRA3P34903 CD177P1-201ENST00000606252 935 ntBASIC17.71■□□□□ 0.43
GABRA3P34903 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
GABRA3P34903 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.71■□□□□ 0.43
GABRA3P34903 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA3P34903 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
GABRA3P34903 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.71■□□□□ 0.42
GABRA3P34903 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA3P34903 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.7■□□□□ 0.42
GABRA3P34903 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
GABRA3P34903 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.7■□□□□ 0.42
GABRA3P34903 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
GABRA3P34903 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA3P34903 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA3P34903 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA3P34903 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
GABRA3P34903 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA3P34903 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA3P34903 AC091390.4-202ENST00000476426 537 ntBASIC17.7■□□□□ 0.42
GABRA3P34903 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.7■□□□□ 0.42
GABRA3P34903 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.7■□□□□ 0.42
GABRA3P34903 AC026271.3-201ENST00000571884 352 ntBASIC17.7■□□□□ 0.42
GABRA3P34903 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
GABRA3P34903 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.7■□□□□ 0.42
GABRA3P34903 AP001412.1-201ENST00000608405 714 ntBASIC17.7■□□□□ 0.42
GABRA3P34903 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA3P34903 TNXA-203ENST00000507684 2038 ntBASIC17.7■□□□□ 0.42
GABRA3P34903 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA3P34903 AC020763.4-201ENST00000623414 4170 ntBASIC17.7■□□□□ 0.42
GABRA3P34903 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA3P34903 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA3P34903 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA3P34903 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
GABRA3P34903 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
GABRA3P34903 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA3P34903 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA3P34903 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.7■□□□□ 0.42
GABRA3P34903 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GABRA3P34903 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.69■□□□□ 0.42
GABRA3P34903 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
GABRA3P34903 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GABRA3P34903 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GABRA3P34903 HCG11-201ENST00000411553 5696 ntBASIC17.69■□□□□ 0.42
GABRA3P34903 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
GABRA3P34903 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GABRA3P34903 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GABRA3P34903 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GABRA3P34903 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GABRA3P34903 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GABRA3P34903 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GABRA3P34903 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GABRA3P34903 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
GABRA3P34903 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GABRA3P34903 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GABRA3P34903 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
GABRA3P34903 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.69■□□□□ 0.42
GABRA3P34903 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.69■□□□□ 0.42
GABRA3P34903 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.69■□□□□ 0.42
GABRA3P34903 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GABRA3P34903 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.69■□□□□ 0.42
GABRA3P34903 AC233702.5-201ENST00000584107 538 ntBASIC17.69■□□□□ 0.42
GABRA3P34903 AC011298.2-201ENST00000617989 482 ntBASIC17.69■□□□□ 0.42
GABRA3P34903 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
GABRA3P34903 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
GABRA3P34903 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GABRA3P34903 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.69■□□□□ 0.42
GABRA3P34903 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
GABRA3P34903 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.69■□□□□ 0.42
GABRA3P34903 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GABRA3P34903 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms