Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MMP11P24347 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
MMP11P24347 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MMP11P24347 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
MMP11P24347 AC073508.3-201ENST00000619697 1419 ntBASIC18.07■□□□□ 0.48
MMP11P24347 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
MMP11P24347 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MMP11P24347 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MMP11P24347 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MMP11P24347 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MMP11P24347 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MMP11P24347 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
MMP11P24347 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.07■□□□□ 0.48
MMP11P24347 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.07■□□□□ 0.48
MMP11P24347 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.07■□□□□ 0.48
MMP11P24347 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.07■□□□□ 0.48
MMP11P24347 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.07■□□□□ 0.48
MMP11P24347 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MMP11P24347 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.07■□□□□ 0.48
MMP11P24347 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
MMP11P24347 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.06■□□□□ 0.48
MMP11P24347 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
MMP11P24347 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
MMP11P24347 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.06■□□□□ 0.48
MMP11P24347 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
MMP11P24347 KRT18P57-201ENST00000443599 1254 ntBASIC18.06■□□□□ 0.48
MMP11P24347 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 ECEL1P2-202ENST00000465689 757 ntBASIC18.06■□□□□ 0.48
MMP11P24347 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
MMP11P24347 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.06■□□□□ 0.48
MMP11P24347 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.06■□□□□ 0.48
MMP11P24347 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
MMP11P24347 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.06■□□□□ 0.48
MMP11P24347 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
MMP11P24347 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
MMP11P24347 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
MMP11P24347 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP11P24347 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP11P24347 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP11P24347 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
MMP11P24347 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MMP11P24347 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
MMP11P24347 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
MMP11P24347 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.05■□□□□ 0.48
MMP11P24347 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.05■□□□□ 0.48
MMP11P24347 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP11P24347 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.05■□□□□ 0.48
MMP11P24347 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.05■□□□□ 0.48
MMP11P24347 LIN28AP1-201ENST00000429574 405 ntBASIC18.05■□□□□ 0.48
MMP11P24347 SLC25A1P2-201ENST00000430693 912 ntBASIC18.05■□□□□ 0.48
MMP11P24347 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.05■□□□□ 0.48
MMP11P24347 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MMP11P24347 AL049597.2-201ENST00000565575 961 ntBASIC18.05■□□□□ 0.48
MMP11P24347 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
MMP11P24347 AC116562.4-202ENST00000641738 218 ntBASIC18.05■□□□□ 0.48
MMP11P24347 AL032819.2-201ENST00000624543 2162 ntBASIC18.05■□□□□ 0.48
MMP11P24347 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP11P24347 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP11P24347 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.05■□□□□ 0.48
MMP11P24347 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.05■□□□□ 0.48
MMP11P24347 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP11P24347 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP11P24347 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
MMP11P24347 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP11P24347 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.04■□□□□ 0.48
MMP11P24347 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
MMP11P24347 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP11P24347 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP11P24347 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.04■□□□□ 0.48
MMP11P24347 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.04■□□□□ 0.48
MMP11P24347 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.04■□□□□ 0.48
MMP11P24347 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MMP11P24347 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.04■□□□□ 0.48
MMP11P24347 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MMP11P24347 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.04■□□□□ 0.48
MMP11P24347 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP11P24347 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.04■□□□□ 0.48
MMP11P24347 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms