Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
HMGN1P05114 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
HMGN1P05114 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HMGN1P05114 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.25■□□□□ 0.35
HMGN1P05114 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN1P05114 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.25■□□□□ 0.35
HMGN1P05114 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HMGN1P05114 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.25■□□□□ 0.35
HMGN1P05114 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN1P05114 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN1P05114 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.25■□□□□ 0.35
HMGN1P05114 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN1P05114 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN1P05114 DUSP5P2-201ENST00000426873 1033 ntBASIC17.25■□□□□ 0.35
HMGN1P05114 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.25■□□□□ 0.35
HMGN1P05114 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN1P05114 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.25■□□□□ 0.35
HMGN1P05114 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.25■□□□□ 0.35
HMGN1P05114 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.25■□□□□ 0.35
HMGN1P05114 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.25■□□□□ 0.35
HMGN1P05114 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.25■□□□□ 0.35
HMGN1P05114 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN1P05114 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HMGN1P05114 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN1P05114 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN1P05114 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN1P05114 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.25■□□□□ 0.35
HMGN1P05114 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN1P05114 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.25■□□□□ 0.35
HMGN1P05114 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN1P05114 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HMGN1P05114 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
HMGN1P05114 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HMGN1P05114 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN1P05114 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN1P05114 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.24■□□□□ 0.35
HMGN1P05114 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGN1P05114 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN1P05114 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN1P05114 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN1P05114 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN1P05114 MIPEPP3-201ENST00000412105 444 ntBASIC17.24■□□□□ 0.35
HMGN1P05114 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGN1P05114 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGN1P05114 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.24■□□□□ 0.35
HMGN1P05114 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.24■□□□□ 0.35
HMGN1P05114 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGN1P05114 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN1P05114 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.24■□□□□ 0.35
HMGN1P05114 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGN1P05114 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN1P05114 AC073111.5-205ENST00000641717 521 ntBASIC17.24■□□□□ 0.35
HMGN1P05114 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
HMGN1P05114 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.24■□□□□ 0.35
HMGN1P05114 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGN1P05114 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HMGN1P05114 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN1P05114 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN1P05114 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN1P05114 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.24■□□□□ 0.35
HMGN1P05114 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN1P05114 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN1P05114 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN1P05114 BICD1-207ENST00000551848 1962 ntBASIC17.24■□□□□ 0.35
HMGN1P05114 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN1P05114 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN1P05114 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN1P05114 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN1P05114 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN1P05114 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN1P05114 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGN1P05114 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGN1P05114 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGN1P05114 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGN1P05114 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGN1P05114 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.23■□□□□ 0.35
HMGN1P05114 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGN1P05114 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
HMGN1P05114 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGN1P05114 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
HMGN1P05114 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGN1P05114 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
HMGN1P05114 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGN1P05114 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGN1P05114 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGN1P05114 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGN1P05114 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HMGN1P05114 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.23■□□□□ 0.35
HMGN1P05114 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.23■□□□□ 0.35
HMGN1P05114 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
HMGN1P05114 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.23■□□□□ 0.35
HMGN1P05114 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.23■□□□□ 0.35
HMGN1P05114 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGN1P05114 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.23■□□□□ 0.35
HMGN1P05114 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.23■□□□□ 0.35
HMGN1P05114 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.23■□□□□ 0.35
HMGN1P05114 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.23■□□□□ 0.35
HMGN1P05114 AL050303.2-201ENST00000619798 666 ntBASIC17.23■□□□□ 0.35
HMGN1P05114 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGN1P05114 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms