Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.69□□□□□ -0.06
COLCA2A8K830 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COLCA2A8K830 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COLCA2A8K830 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
COLCA2A8K830 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COLCA2A8K830 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COLCA2A8K830 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
COLCA2A8K830 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COLCA2A8K830 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
COLCA2A8K830 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
COLCA2A8K830 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.69□□□□□ -0.06
COLCA2A8K830 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
COLCA2A8K830 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COLCA2A8K830 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COLCA2A8K830 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.68□□□□□ -0.06
COLCA2A8K830 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COLCA2A8K830 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
COLCA2A8K830 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
COLCA2A8K830 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
COLCA2A8K830 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.68□□□□□ -0.06
COLCA2A8K830 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COLCA2A8K830 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
COLCA2A8K830 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COLCA2A8K830 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
COLCA2A8K830 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COLCA2A8K830 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COLCA2A8K830 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COLCA2A8K830 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
COLCA2A8K830 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
COLCA2A8K830 AC105020.1-201ENST00000435356 2205 ntBASIC14.68□□□□□ -0.06
COLCA2A8K830 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COLCA2A8K830 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COLCA2A8K830 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COLCA2A8K830 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC14.68□□□□□ -0.06
COLCA2A8K830 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC14.68□□□□□ -0.06
COLCA2A8K830 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
COLCA2A8K830 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
COLCA2A8K830 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
COLCA2A8K830 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COLCA2A8K830 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.68□□□□□ -0.06
COLCA2A8K830 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COLCA2A8K830 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
COLCA2A8K830 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
COLCA2A8K830 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COLCA2A8K830 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
COLCA2A8K830 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
COLCA2A8K830 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COLCA2A8K830 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COLCA2A8K830 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COLCA2A8K830 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COLCA2A8K830 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
COLCA2A8K830 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COLCA2A8K830 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COLCA2A8K830 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
COLCA2A8K830 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COLCA2A8K830 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.67□□□□□ -0.06
COLCA2A8K830 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
COLCA2A8K830 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.67□□□□□ -0.06
COLCA2A8K830 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COLCA2A8K830 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
COLCA2A8K830 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COLCA2A8K830 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
COLCA2A8K830 AC138028.4-201ENST00000564984 1845 ntBASIC14.67□□□□□ -0.06
COLCA2A8K830 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
COLCA2A8K830 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.67□□□□□ -0.06
COLCA2A8K830 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COLCA2A8K830 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COLCA2A8K830 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.67□□□□□ -0.06
COLCA2A8K830 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.67□□□□□ -0.06
COLCA2A8K830 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC14.67□□□□□ -0.06
COLCA2A8K830 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
COLCA2A8K830 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COLCA2A8K830 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COLCA2A8K830 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.67□□□□□ -0.06
COLCA2A8K830 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.67□□□□□ -0.06
COLCA2A8K830 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COLCA2A8K830 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.67□□□□□ -0.06
COLCA2A8K830 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
COLCA2A8K830 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COLCA2A8K830 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.67□□□□□ -0.06
COLCA2A8K830 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.67□□□□□ -0.06
COLCA2A8K830 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COLCA2A8K830 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
COLCA2A8K830 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COLCA2A8K830 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
COLCA2A8K830 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COLCA2A8K830 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.66□□□□□ -0.06
COLCA2A8K830 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.66□□□□□ -0.06
COLCA2A8K830 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COLCA2A8K830 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COLCA2A8K830 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
COLCA2A8K830 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
COLCA2A8K830 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COLCA2A8K830 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COLCA2A8K830 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COLCA2A8K830 LINC00602-201ENST00000629776 2065 ntBASIC14.66□□□□□ -0.06
COLCA2A8K830 MTX2-204ENST00000443241 799 ntTSL 3 BASIC14.66□□□□□ -0.06
COLCA2A8K830 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.66□□□□□ -0.06
COLCA2A8K830 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COLCA2A8K830 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms