Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 IKBKGP1-201ENST00000612193 1073 ntBASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 AC007613.1-201ENST00000572811 2597 ntBASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 SDHAP1-207ENST00000440850 2000 ntBASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 BX276092.2-201ENST00000417668 665 ntBASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 RAP2CP1-201ENST00000605103 478 ntBASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMCC3Q9ULS5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 KRT8P8-201ENST00000434750 1448 ntBASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 AP006587.1-201ENST00000534129 1502 ntBASIC17.67■□□□□ 0.42
TMCC3Q9ULS5 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMCC3Q9ULS5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.66■□□□□ 0.42
TMCC3Q9ULS5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.66■□□□□ 0.42
TMCC3Q9ULS5 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMCC3Q9ULS5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMCC3Q9ULS5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMCC3Q9ULS5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMCC3Q9ULS5 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.66■□□□□ 0.42
TMCC3Q9ULS5 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMCC3Q9ULS5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.66■□□□□ 0.42
TMCC3Q9ULS5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMCC3Q9ULS5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMCC3Q9ULS5 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms