Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NEK1Q96PY6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NEK1Q96PY6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NEK1Q96PY6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
NEK1Q96PY6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC22.58■■□□□ 1.21
NEK1Q96PY6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
NEK1Q96PY6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NEK1Q96PY6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NEK1Q96PY6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC22.58■■□□□ 1.21
NEK1Q96PY6 RPS2P55-201ENST00000397318 883 ntBASIC22.58■■□□□ 1.21
NEK1Q96PY6 AC008040.2-201ENST00000461049 708 ntBASIC22.58■■□□□ 1.21
NEK1Q96PY6 AC107956.1-201ENST00000494359 873 ntBASIC22.58■■□□□ 1.21
NEK1Q96PY6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
NEK1Q96PY6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
NEK1Q96PY6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.58■■□□□ 1.21
NEK1Q96PY6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.58■■□□□ 1.21
NEK1Q96PY6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
NEK1Q96PY6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
NEK1Q96PY6 CROCCP3-202ENST00000420820 1947 ntBASIC22.58■■□□□ 1.21
NEK1Q96PY6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.2
NEK1Q96PY6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
NEK1Q96PY6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
NEK1Q96PY6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
NEK1Q96PY6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NEK1Q96PY6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC22.57■■□□□ 1.2
NEK1Q96PY6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
NEK1Q96PY6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NEK1Q96PY6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC22.57■■□□□ 1.2
NEK1Q96PY6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
NEK1Q96PY6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
NEK1Q96PY6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC22.57■■□□□ 1.2
NEK1Q96PY6 AC011506.1-201ENST00000474329 610 ntBASIC22.57■■□□□ 1.2
NEK1Q96PY6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NEK1Q96PY6 CD177P1-201ENST00000606252 935 ntBASIC22.57■■□□□ 1.2
NEK1Q96PY6 AC130371.2-201ENST00000619443 611 ntBASIC22.57■■□□□ 1.2
NEK1Q96PY6 AP006294.2-201ENST00000641667 209 ntBASIC22.57■■□□□ 1.2
NEK1Q96PY6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
NEK1Q96PY6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NEK1Q96PY6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NEK1Q96PY6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
NEK1Q96PY6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC22.57■■□□□ 1.2
NEK1Q96PY6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC22.57■■□□□ 1.2
NEK1Q96PY6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
NEK1Q96PY6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NEK1Q96PY6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NEK1Q96PY6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.57■■□□□ 1.2
NEK1Q96PY6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.57■■□□□ 1.2
NEK1Q96PY6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
NEK1Q96PY6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NEK1Q96PY6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
NEK1Q96PY6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC22.56■■□□□ 1.2
NEK1Q96PY6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NEK1Q96PY6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NEK1Q96PY6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NEK1Q96PY6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NEK1Q96PY6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NEK1Q96PY6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC22.56■■□□□ 1.2
NEK1Q96PY6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.56■■□□□ 1.2
NEK1Q96PY6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NEK1Q96PY6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
NEK1Q96PY6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.56■■□□□ 1.2
NEK1Q96PY6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.56■■□□□ 1.2
NEK1Q96PY6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.56■■□□□ 1.2
NEK1Q96PY6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.56■■□□□ 1.2
NEK1Q96PY6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC22.56■■□□□ 1.2
NEK1Q96PY6 AC011298.2-201ENST00000617989 482 ntBASIC22.56■■□□□ 1.2
NEK1Q96PY6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NEK1Q96PY6 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.56■■□□□ 1.2
NEK1Q96PY6 AL020996.1-203ENST00000536896 2307 ntBASIC22.56■■□□□ 1.2
NEK1Q96PY6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NEK1Q96PY6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NEK1Q96PY6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
NEK1Q96PY6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NEK1Q96PY6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
NEK1Q96PY6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
NEK1Q96PY6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NEK1Q96PY6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NEK1Q96PY6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NEK1Q96PY6 B3GAT3P1-201ENST00000471720 806 ntBASIC22.55■■□□□ 1.2
NEK1Q96PY6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC22.55■■□□□ 1.2
NEK1Q96PY6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.55■■□□□ 1.2
NEK1Q96PY6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NEK1Q96PY6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC22.55■■□□□ 1.2
NEK1Q96PY6 AC233702.5-201ENST00000584107 538 ntBASIC22.55■■□□□ 1.2
NEK1Q96PY6 MIR6786-201ENST00000616843 113 ntBASIC22.55■■□□□ 1.2
NEK1Q96PY6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
NEK1Q96PY6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NEK1Q96PY6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NEK1Q96PY6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC22.55■■□□□ 1.2
NEK1Q96PY6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC22.55■■□□□ 1.2
NEK1Q96PY6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NEK1Q96PY6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
NEK1Q96PY6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NEK1Q96PY6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
NEK1Q96PY6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NEK1Q96PY6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
NEK1Q96PY6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NEK1Q96PY6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC22.54■■□□□ 1.2
NEK1Q96PY6 MESTP1-201ENST00000404287 994 ntBASIC22.54■■□□□ 1.2
NEK1Q96PY6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms