Protein–RNA interactions for Protein: Q96A83

COL26A1, Collagen alpha-1(XXVI) chain, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL26A1Q96A83 AC113347.1-201ENST00000413321 391 ntBASIC18.43■□□□□ 0.54
COL26A1Q96A83 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
COL26A1Q96A83 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.43■□□□□ 0.54
COL26A1Q96A83 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.43■□□□□ 0.54
COL26A1Q96A83 MIR6786-201ENST00000616843 113 ntBASIC18.43■□□□□ 0.54
COL26A1Q96A83 AL445675.2-201ENST00000620291 557 ntBASIC18.43■□□□□ 0.54
COL26A1Q96A83 AC131212.4-201ENST00000623606 975 ntBASIC18.43■□□□□ 0.54
COL26A1Q96A83 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL26A1Q96A83 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
COL26A1Q96A83 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.43■□□□□ 0.54
COL26A1Q96A83 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL26A1Q96A83 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL26A1Q96A83 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL26A1Q96A83 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
COL26A1Q96A83 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
COL26A1Q96A83 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
COL26A1Q96A83 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL26A1Q96A83 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
COL26A1Q96A83 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL26A1Q96A83 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
COL26A1Q96A83 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
COL26A1Q96A83 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL26A1Q96A83 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
COL26A1Q96A83 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL26A1Q96A83 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL26A1Q96A83 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
COL26A1Q96A83 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL26A1Q96A83 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
COL26A1Q96A83 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
COL26A1Q96A83 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
COL26A1Q96A83 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.42■□□□□ 0.54
COL26A1Q96A83 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL26A1Q96A83 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.42■□□□□ 0.54
COL26A1Q96A83 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
COL26A1Q96A83 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.42■□□□□ 0.54
COL26A1Q96A83 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.42■□□□□ 0.54
COL26A1Q96A83 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL26A1Q96A83 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL26A1Q96A83 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL26A1Q96A83 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.41■□□□□ 0.54
COL26A1Q96A83 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.41■□□□□ 0.54
COL26A1Q96A83 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
COL26A1Q96A83 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.41■□□□□ 0.54
COL26A1Q96A83 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL26A1Q96A83 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.41■□□□□ 0.54
COL26A1Q96A83 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.41■□□□□ 0.54
COL26A1Q96A83 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.41■□□□□ 0.54
COL26A1Q96A83 WWOX-216ENST00000569818 525 ntBASIC18.41■□□□□ 0.54
COL26A1Q96A83 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.41■□□□□ 0.54
COL26A1Q96A83 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
COL26A1Q96A83 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.41■□□□□ 0.54
COL26A1Q96A83 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL26A1Q96A83 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.41■□□□□ 0.54
COL26A1Q96A83 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL26A1Q96A83 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL26A1Q96A83 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.41■□□□□ 0.54
COL26A1Q96A83 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL26A1Q96A83 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL26A1Q96A83 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL26A1Q96A83 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
COL26A1Q96A83 TREX1-205ENST00000625293 1783 ntBASIC18.4■□□□□ 0.54
COL26A1Q96A83 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL26A1Q96A83 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL26A1Q96A83 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL26A1Q96A83 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.4■□□□□ 0.54
COL26A1Q96A83 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.4■□□□□ 0.54
COL26A1Q96A83 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
COL26A1Q96A83 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL26A1Q96A83 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
COL26A1Q96A83 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.4■□□□□ 0.54
COL26A1Q96A83 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.4■□□□□ 0.54
COL26A1Q96A83 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL26A1Q96A83 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.4■□□□□ 0.54
COL26A1Q96A83 REXO1L10P-201ENST00000615707 1290 ntBASIC18.4■□□□□ 0.54
COL26A1Q96A83 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.4■□□□□ 0.54
COL26A1Q96A83 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
COL26A1Q96A83 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL26A1Q96A83 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL26A1Q96A83 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL26A1Q96A83 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL26A1Q96A83 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL26A1Q96A83 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL26A1Q96A83 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.39■□□□□ 0.54
COL26A1Q96A83 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COL26A1Q96A83 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COL26A1Q96A83 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
COL26A1Q96A83 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL26A1Q96A83 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL26A1Q96A83 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL26A1Q96A83 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL26A1Q96A83 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.39■□□□□ 0.53
COL26A1Q96A83 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
COL26A1Q96A83 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL26A1Q96A83 FDX1P1-201ENST00000449115 551 ntBASIC18.39■□□□□ 0.53
COL26A1Q96A83 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.39■□□□□ 0.53
COL26A1Q96A83 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL26A1Q96A83 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL26A1Q96A83 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.39■□□□□ 0.53
COL26A1Q96A83 HLA-A-209ENST00000638375 975 ntBASIC18.39■□□□□ 0.53
COL26A1Q96A83 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms