Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 NOC2LP2-201ENST00000407594 1944 ntBASIC19.02■□□□□ 0.63
RAB3IL1Q8TBN0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 CNN2P6-201ENST00000439038 900 ntBASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 AC104417.2-201ENST00000562989 1793 ntBASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB3IL1Q8TBN0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 DBI-210ENST00000542275 757 ntTSL 5 BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 ANKRD18DP-204ENST00000455355 1975 ntBASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB3IL1Q8TBN0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB3IL1Q8TBN0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB3IL1Q8TBN0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.99■□□□□ 0.63
RAB3IL1Q8TBN0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RAB3IL1Q8TBN0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB3IL1Q8TBN0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
RAB3IL1Q8TBN0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB3IL1Q8TBN0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RAB3IL1Q8TBN0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB3IL1Q8TBN0 AL355472.2-201ENST00000422958 438 ntBASIC18.99■□□□□ 0.63
RAB3IL1Q8TBN0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RAB3IL1Q8TBN0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.99■□□□□ 0.63
RAB3IL1Q8TBN0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.99■□□□□ 0.63
RAB3IL1Q8TBN0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.99■□□□□ 0.63
RAB3IL1Q8TBN0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RAB3IL1Q8TBN0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB3IL1Q8TBN0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RAB3IL1Q8TBN0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.99■□□□□ 0.63
RAB3IL1Q8TBN0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB3IL1Q8TBN0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.99■□□□□ 0.63
RAB3IL1Q8TBN0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RAB3IL1Q8TBN0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 AC008694.1-202ENST00000636953 945 ntBASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms