Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 MLEC-202ENST00000412616 841 ntTSL 3 BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
HIST3H2BBQ8N257 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
HIST3H2BBQ8N257 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST3H2BBQ8N257 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
HIST3H2BBQ8N257 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST3H2BBQ8N257 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST3H2BBQ8N257 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST3H2BBQ8N257 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST3H2BBQ8N257 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST3H2BBQ8N257 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.27□□□□□ -0.12
HIST3H2BBQ8N257 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST3H2BBQ8N257 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST3H2BBQ8N257 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HIST3H2BBQ8N257 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST3H2BBQ8N257 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST3H2BBQ8N257 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC14.27□□□□□ -0.13
HIST3H2BBQ8N257 AC133552.2-201ENST00000619106 1032 ntBASIC14.27□□□□□ -0.13
HIST3H2BBQ8N257 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIST3H2BBQ8N257 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST3H2BBQ8N257 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST3H2BBQ8N257 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.27□□□□□ -0.13
HIST3H2BBQ8N257 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIST3H2BBQ8N257 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HIST3H2BBQ8N257 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.27□□□□□ -0.13
HIST3H2BBQ8N257 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST3H2BBQ8N257 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
HIST3H2BBQ8N257 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST3H2BBQ8N257 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HIST3H2BBQ8N257 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.27□□□□□ -0.13
HIST3H2BBQ8N257 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST3H2BBQ8N257 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.27□□□□□ -0.13
HIST3H2BBQ8N257 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST3H2BBQ8N257 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIST3H2BBQ8N257 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST3H2BBQ8N257 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST3H2BBQ8N257 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 CR559946.2-201ENST00000623684 991 ntBASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST3H2BBQ8N257 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms