Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.95■□□□□ 0.62
NUDCD3Q8IVD9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.95■□□□□ 0.62
NUDCD3Q8IVD9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.95■□□□□ 0.62
NUDCD3Q8IVD9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NUDCD3Q8IVD9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NUDCD3Q8IVD9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.95■□□□□ 0.62
NUDCD3Q8IVD9 MIR6821-201ENST00000617625 74 ntBASIC18.95■□□□□ 0.62
NUDCD3Q8IVD9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUDCD3Q8IVD9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NUDCD3Q8IVD9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUDCD3Q8IVD9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NUDCD3Q8IVD9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUDCD3Q8IVD9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUDCD3Q8IVD9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUDCD3Q8IVD9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 KRT8P8-201ENST00000434750 1448 ntBASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUDCD3Q8IVD9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 PCDHB18P-201ENST00000524813 2368 ntBASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 AC073210.2-201ENST00000430369 194 ntBASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 AC005829.2-201ENST00000571422 1056 ntBASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 ANO7L1-203ENST00000602586 1720 ntBASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.93■□□□□ 0.62
NUDCD3Q8IVD9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 NOC2LP2-201ENST00000407594 1944 ntBASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms