Protein–RNA interactions for Protein: Q6NT76

HMBOX1, Homeobox-containing protein 1, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1Q6NT76 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMBOX1Q6NT76 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.03■□□□□ 0.48
HMBOX1Q6NT76 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.03■□□□□ 0.48
HMBOX1Q6NT76 FAM201B-201ENST00000458407 597 ntBASIC18.03■□□□□ 0.48
HMBOX1Q6NT76 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.03■□□□□ 0.48
HMBOX1Q6NT76 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.03■□□□□ 0.48
HMBOX1Q6NT76 KRT18P6-201ENST00000555540 1265 ntBASIC18.03■□□□□ 0.48
HMBOX1Q6NT76 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.03■□□□□ 0.48
HMBOX1Q6NT76 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HMBOX1Q6NT76 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.03■□□□□ 0.48
HMBOX1Q6NT76 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.03■□□□□ 0.48
HMBOX1Q6NT76 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.03■□□□□ 0.48
HMBOX1Q6NT76 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.03■□□□□ 0.48
HMBOX1Q6NT76 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HMBOX1Q6NT76 AC010980.2-201ENST00000587099 1412 ntBASIC18.03■□□□□ 0.48
HMBOX1Q6NT76 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMBOX1Q6NT76 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMBOX1Q6NT76 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HMBOX1Q6NT76 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.03■□□□□ 0.48
HMBOX1Q6NT76 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.03■□□□□ 0.48
HMBOX1Q6NT76 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMBOX1Q6NT76 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
HMBOX1Q6NT76 IRX1P1-201ENST00000438849 1838 ntBASIC18.02■□□□□ 0.48
HMBOX1Q6NT76 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMBOX1Q6NT76 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMBOX1Q6NT76 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.02■□□□□ 0.48
HMBOX1Q6NT76 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.02■□□□□ 0.48
HMBOX1Q6NT76 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMBOX1Q6NT76 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMBOX1Q6NT76 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.02■□□□□ 0.48
HMBOX1Q6NT76 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.02■□□□□ 0.48
HMBOX1Q6NT76 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.02■□□□□ 0.48
HMBOX1Q6NT76 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.02■□□□□ 0.48
HMBOX1Q6NT76 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
HMBOX1Q6NT76 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMBOX1Q6NT76 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
HMBOX1Q6NT76 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
HMBOX1Q6NT76 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
HMBOX1Q6NT76 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.02■□□□□ 0.48
HMBOX1Q6NT76 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
HMBOX1Q6NT76 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.02■□□□□ 0.47
HMBOX1Q6NT76 AC020763.4-201ENST00000623414 4170 ntBASIC18.02■□□□□ 0.47
HMBOX1Q6NT76 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.02■□□□□ 0.47
HMBOX1Q6NT76 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HMBOX1Q6NT76 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
HMBOX1Q6NT76 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 CYP2T3P-201ENST00000601990 817 ntBASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 AC018553.1-201ENST00000616682 1458 ntBASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 ANO7L1-203ENST00000602586 1720 ntBASIC18.01■□□□□ 0.47
HMBOX1Q6NT76 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
HMBOX1Q6NT76 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMBOX1Q6NT76 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
HMBOX1Q6NT76 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
HMBOX1Q6NT76 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18■□□□□ 0.47
HMBOX1Q6NT76 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMBOX1Q6NT76 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18■□□□□ 0.47
HMBOX1Q6NT76 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
HMBOX1Q6NT76 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HMBOX1Q6NT76 KRT18P68-201ENST00000392293 1000 ntBASIC18■□□□□ 0.47
HMBOX1Q6NT76 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HMBOX1Q6NT76 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18■□□□□ 0.47
HMBOX1Q6NT76 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
HMBOX1Q6NT76 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18■□□□□ 0.47
HMBOX1Q6NT76 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMBOX1Q6NT76 AC139713.2-201ENST00000641328 2723 ntBASIC18■□□□□ 0.47
HMBOX1Q6NT76 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
HMBOX1Q6NT76 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMBOX1Q6NT76 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMBOX1Q6NT76 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18■□□□□ 0.47
HMBOX1Q6NT76 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMBOX1Q6NT76 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HMBOX1Q6NT76 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
HMBOX1Q6NT76 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms