Protein–RNA interactions for Protein: Q00653

NFKB2, Nuclear factor NF-kappa-B p100 subunit, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB2Q00653 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.9■□□□□ 0.62
NFKB2Q00653 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.9■□□□□ 0.62
NFKB2Q00653 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.9■□□□□ 0.62
NFKB2Q00653 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.9■□□□□ 0.62
NFKB2Q00653 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NFKB2Q00653 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.9■□□□□ 0.62
NFKB2Q00653 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NFKB2Q00653 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NFKB2Q00653 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
NFKB2Q00653 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NFKB2Q00653 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NFKB2Q00653 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
NFKB2Q00653 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.9■□□□□ 0.62
NFKB2Q00653 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NFKB2Q00653 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NFKB2Q00653 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NFKB2Q00653 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.9■□□□□ 0.62
NFKB2Q00653 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
NFKB2Q00653 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NFKB2Q00653 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.9■□□□□ 0.62
NFKB2Q00653 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.9■□□□□ 0.62
NFKB2Q00653 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.89■□□□□ 0.61
NFKB2Q00653 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NFKB2Q00653 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NFKB2Q00653 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
NFKB2Q00653 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
NFKB2Q00653 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.89■□□□□ 0.61
NFKB2Q00653 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
NFKB2Q00653 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.89■□□□□ 0.61
NFKB2Q00653 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NFKB2Q00653 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
NFKB2Q00653 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.89■□□□□ 0.61
NFKB2Q00653 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NFKB2Q00653 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.89■□□□□ 0.61
NFKB2Q00653 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.89■□□□□ 0.61
NFKB2Q00653 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.89■□□□□ 0.61
NFKB2Q00653 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.89■□□□□ 0.61
NFKB2Q00653 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NFKB2Q00653 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NFKB2Q00653 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.89■□□□□ 0.61
NFKB2Q00653 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NFKB2Q00653 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.89■□□□□ 0.61
NFKB2Q00653 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NFKB2Q00653 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NFKB2Q00653 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB2Q00653 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB2Q00653 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.88■□□□□ 0.61
NFKB2Q00653 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB2Q00653 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB2Q00653 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB2Q00653 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB2Q00653 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
NFKB2Q00653 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB2Q00653 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.88■□□□□ 0.61
NFKB2Q00653 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB2Q00653 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB2Q00653 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB2Q00653 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB2Q00653 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB2Q00653 PRKY-204ENST00000533551 1019 ntBASIC18.88■□□□□ 0.61
NFKB2Q00653 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.88■□□□□ 0.61
NFKB2Q00653 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.88■□□□□ 0.61
NFKB2Q00653 AC110285.5-201ENST00000611501 352 ntBASIC18.88■□□□□ 0.61
NFKB2Q00653 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB2Q00653 AL121829.2-201ENST00000620908 328 ntBASIC18.88■□□□□ 0.61
NFKB2Q00653 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
NFKB2Q00653 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
NFKB2Q00653 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.88■□□□□ 0.61
NFKB2Q00653 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB2Q00653 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.88■□□□□ 0.61
NFKB2Q00653 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB2Q00653 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
NFKB2Q00653 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB2Q00653 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB2Q00653 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB2Q00653 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NFKB2Q00653 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB2Q00653 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB2Q00653 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB2Q00653 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.88■□□□□ 0.61
NFKB2Q00653 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB2Q00653 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NFKB2Q00653 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB2Q00653 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.87■□□□□ 0.61
NFKB2Q00653 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NFKB2Q00653 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NFKB2Q00653 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NFKB2Q00653 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NFKB2Q00653 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NFKB2Q00653 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NFKB2Q00653 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NFKB2Q00653 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
NFKB2Q00653 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NFKB2Q00653 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NFKB2Q00653 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.87■□□□□ 0.61
NFKB2Q00653 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.87■□□□□ 0.61
NFKB2Q00653 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.87■□□□□ 0.61
NFKB2Q00653 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.87■□□□□ 0.61
NFKB2Q00653 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.87■□□□□ 0.61
NFKB2Q00653 AL353708.3-201ENST00000610272 989 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms