Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.2■□□□□ 0.34
LSM3P62310 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.2■□□□□ 0.34
LSM3P62310 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LSM3P62310 TPRG1LP1-201ENST00000598702 760 ntBASIC17.2■□□□□ 0.34
LSM3P62310 AL355001.2-201ENST00000620617 1191 ntBASIC17.2■□□□□ 0.34
LSM3P62310 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSM3P62310 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LSM3P62310 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSM3P62310 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
LSM3P62310 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LSM3P62310 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSM3P62310 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSM3P62310 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LSM3P62310 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LSM3P62310 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM3P62310 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LSM3P62310 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
LSM3P62310 ANO7L1-203ENST00000602586 1720 ntBASIC17.19■□□□□ 0.34
LSM3P62310 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LSM3P62310 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.19■□□□□ 0.34
LSM3P62310 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM3P62310 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LSM3P62310 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LSM3P62310 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.19■□□□□ 0.34
LSM3P62310 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.19■□□□□ 0.34
LSM3P62310 AC099791.1-201ENST00000416440 715 ntBASIC17.19■□□□□ 0.34
LSM3P62310 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.19■□□□□ 0.34
LSM3P62310 LINC00896-202ENST00000609602 2128 ntBASIC17.19■□□□□ 0.34
LSM3P62310 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.19■□□□□ 0.34
LSM3P62310 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM3P62310 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.19■□□□□ 0.34
LSM3P62310 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LSM3P62310 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM3P62310 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LSM3P62310 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM3P62310 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LSM3P62310 RBM17P2-201ENST00000616397 1405 ntBASIC17.19■□□□□ 0.34
LSM3P62310 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM3P62310 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.19■□□□□ 0.34
LSM3P62310 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LSM3P62310 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM3P62310 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM3P62310 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
LSM3P62310 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM3P62310 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.19■□□□□ 0.34
LSM3P62310 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.19■□□□□ 0.34
LSM3P62310 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM3P62310 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LSM3P62310 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.19■□□□□ 0.34
LSM3P62310 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.19■□□□□ 0.34
LSM3P62310 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM3P62310 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LSM3P62310 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LSM3P62310 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.18■□□□□ 0.34
LSM3P62310 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM3P62310 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM3P62310 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LSM3P62310 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
LSM3P62310 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM3P62310 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LSM3P62310 AC126763.1-201ENST00000552015 2118 ntBASIC17.18■□□□□ 0.34
LSM3P62310 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LSM3P62310 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM3P62310 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM3P62310 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LSM3P62310 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.18■□□□□ 0.34
LSM3P62310 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LSM3P62310 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.18■□□□□ 0.34
LSM3P62310 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.18■□□□□ 0.34
LSM3P62310 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM3P62310 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
LSM3P62310 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.18■□□□□ 0.34
LSM3P62310 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM3P62310 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM3P62310 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LSM3P62310 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LSM3P62310 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LSM3P62310 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM3P62310 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM3P62310 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM3P62310 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.18■□□□□ 0.34
LSM3P62310 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM3P62310 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM3P62310 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM3P62310 AC008894.3-201ENST00000624324 3103 ntBASIC17.18■□□□□ 0.34
LSM3P62310 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM3P62310 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM3P62310 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.18■□□□□ 0.34
LSM3P62310 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LSM3P62310 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM3P62310 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM3P62310 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM3P62310 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.17■□□□□ 0.34
LSM3P62310 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM3P62310 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LSM3P62310 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM3P62310 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM3P62310 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.17■□□□□ 0.34
LSM3P62310 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM3P62310 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms