Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-5P52952 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.3■□□□□ 0.2
NKX2-5P52952 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.3■□□□□ 0.2
NKX2-5P52952 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.3■□□□□ 0.2
NKX2-5P52952 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-5P52952 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-5P52952 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-5P52952 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.29■□□□□ 0.2
NKX2-5P52952 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-5P52952 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
NKX2-5P52952 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-5P52952 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.29■□□□□ 0.2
NKX2-5P52952 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-5P52952 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-5P52952 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
NKX2-5P52952 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-5P52952 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX2-5P52952 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX2-5P52952 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-5P52952 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX2-5P52952 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.29■□□□□ 0.2
NKX2-5P52952 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-5P52952 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX2-5P52952 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX2-5P52952 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.29■□□□□ 0.2
NKX2-5P52952 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX2-5P52952 AC019171.1-201ENST00000601251 1056 ntBASIC16.29■□□□□ 0.2
NKX2-5P52952 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NKX2-5P52952 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-5P52952 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
NKX2-5P52952 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NKX2-5P52952 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-5P52952 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX2-5P52952 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-5P52952 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX2-5P52952 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NKX2-5P52952 PP12613-201ENST00000424958 2230 ntBASIC16.29■□□□□ 0.2
NKX2-5P52952 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-5P52952 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-5P52952 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.28■□□□□ 0.2
NKX2-5P52952 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.28■□□□□ 0.2
NKX2-5P52952 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.28■□□□□ 0.2
NKX2-5P52952 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-5P52952 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
NKX2-5P52952 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-5P52952 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NKX2-5P52952 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-5P52952 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-5P52952 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.28■□□□□ 0.2
NKX2-5P52952 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-5P52952 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-5P52952 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
NKX2-5P52952 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.28■□□□□ 0.2
NKX2-5P52952 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.28■□□□□ 0.2
NKX2-5P52952 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-5P52952 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-5P52952 GPX1-201ENST00000419349 1106 ntBASIC16.28■□□□□ 0.2
NKX2-5P52952 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NKX2-5P52952 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.28■□□□□ 0.2
NKX2-5P52952 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.28■□□□□ 0.2
NKX2-5P52952 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-5P52952 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-5P52952 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-5P52952 PCDHA1-201ENST00000378133 2726 ntBASIC16.28■□□□□ 0.2
NKX2-5P52952 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-5P52952 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-5P52952 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-5P52952 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.28■□□□□ 0.2
NKX2-5P52952 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.28■□□□□ 0.2
NKX2-5P52952 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NKX2-5P52952 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-5P52952 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-5P52952 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-5P52952 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.27■□□□□ 0.2
NKX2-5P52952 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-5P52952 LINC02199-201ENST00000506655 2702 ntBASIC16.27■□□□□ 0.2
NKX2-5P52952 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.27■□□□□ 0.2
NKX2-5P52952 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.27■□□□□ 0.2
NKX2-5P52952 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-5P52952 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.27■□□□□ 0.2
NKX2-5P52952 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-5P52952 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-5P52952 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NKX2-5P52952 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-5P52952 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-5P52952 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-5P52952 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-5P52952 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
NKX2-5P52952 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.27■□□□□ 0.19
NKX2-5P52952 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.27■□□□□ 0.19
NKX2-5P52952 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NKX2-5P52952 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NKX2-5P52952 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.27■□□□□ 0.19
NKX2-5P52952 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NKX2-5P52952 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
NKX2-5P52952 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
NKX2-5P52952 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NKX2-5P52952 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.26■□□□□ 0.19
NKX2-5P52952 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.26■□□□□ 0.19
NKX2-5P52952 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms