Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.85□□□□□ -1.477e-7■■■□□ 19.2
MATR3P43243 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.53e-6■■■□□ 19.2
MATR3P43243 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.423e-6■■■□□ 19.2
MATR3P43243 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.133e-6■■■□□ 19.2
MATR3P43243 LCOR-209ENST00000540664 2213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.763e-6■■■□□ 19.2
MATR3P43243 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.63e-6■■■□□ 19.2
MATR3P43243 LCOR-208ENST00000493486 245 ntTSL 33.72□□□□□ -1.813e-6■■■□□ 19.2
MATR3P43243 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.43□□□□□ -1.863e-6■■■□□ 19.2
MATR3P43243 YTHDC2-201ENST00000161863 6316 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.295e-6■■■□□ 19.2
MATR3P43243 YTHDC2-203ENST00000506333 784 ntTSL 54.63□□□□□ -1.675e-6■■■□□ 19.2
MATR3P43243 PTCHD4-202ENST00000398738 3232 ntTSL 1 (best)11.18□□□□□ -0.624e-7■■■□□ 19.2
MATR3P43243 MAP3K4-213ENST00000542952 629 ntTSL 416.13■□□□□ 0.174e-7■■■□□ 19.2
MATR3P43243 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.72■■□□□ 1.879e-8■■■□□ 19.2
MATR3P43243 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.17■■□□□ 1.629e-8■■■□□ 19.2
MATR3P43243 DAZAP1-204ENST00000586579 619 ntTSL 324.85■■□□□ 1.579e-8■■■□□ 19.2
MATR3P43243 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.559e-8■■■□□ 19.2
MATR3P43243 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.399e-8■■■□□ 19.2
MATR3P43243 DAZAP1-210ENST00000592453 1021 ntTSL 516.25■□□□□ 0.199e-8■■■□□ 19.2
MATR3P43243 DAZAP1-207ENST00000589484 3414 ntTSL 214.17□□□□□ -0.149e-8■■■□□ 19.2
MATR3P43243 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.763e-7■■■□□ 19.2
MATR3P43243 MRPS5-207ENST00000482568 711 ntTSL 314.54□□□□□ -0.083e-7■■■□□ 19.2
MATR3P43243 MRPS5-202ENST00000345084 1359 ntTSL 212.98□□□□□ -0.333e-7■■■□□ 19.2
MATR3P43243 MRPS5-203ENST00000461916 793 ntTSL 211.39□□□□□ -0.593e-7■■■□□ 19.2
MATR3P43243 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.9■■□□□ 1.262e-6■■■□□ 19.2
MATR3P43243 LSM14A-207ENST00000589878 559 ntTSL 419.96■□□□□ 0.792e-6■■■□□ 19.2
MATR3P43243 LSM14A-205ENST00000586157 944 ntTSL 515.83■□□□□ 0.122e-6■■■□□ 19.2
MATR3P43243 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.052e-6■■■□□ 19.2
MATR3P43243 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 02e-6■■■□□ 19.2
MATR3P43243 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.63e-6■■■□□ 19.2
MATR3P43243 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC8.57□□□□□ -1.049e-15■■■□□ 19.2
MATR3P43243 AL034397.3-201ENST00000618234 1690 ntTSL 1 (best)7.7□□□□□ -1.189e-15■■■□□ 19.2
MATR3P43243 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.95■■□□□ 1.261e-8■■■□□ 19.2
MATR3P43243 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.71□□□□□ -1.56e-7■■■□□ 19.2
MATR3P43243 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.04□□□□□ -1.766e-7■■■□□ 19.2
MATR3P43243 ITPR2-203ENST00000451599 2577 ntTSL 1 (best)10.98□□□□□ -0.653e-7■■■□□ 19.1
MATR3P43243 L3MBTL4-203ENST00000400105 3546 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.841e-6■■■□□ 19.1
MATR3P43243 ETFA-201ENST00000267950 1289 ntTSL 523.51■■□□□ 1.353e-6■■■□□ 19.1
MATR3P43243 ETFA-215ENST00000560595 917 ntTSL 1 (best)22.38■■□□□ 1.173e-6■■■□□ 19.1
MATR3P43243 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.51■■□□□ 1.033e-6■■■□□ 19.1
MATR3P43243 SEC22A-208ENST00000487572 870 ntTSL 321.47■■□□□ 1.032e-6■■■□□ 19.1
MATR3P43243 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.35■□□□□ 0.853e-6■■■□□ 19.1
MATR3P43243 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.81■□□□□ 0.63e-6■■■□□ 19.1
MATR3P43243 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.553e-6■■■□□ 19.1
MATR3P43243 SEC22A-203ENST00000466950 565 ntTSL 514.39□□□□□ -0.112e-6■■■□□ 19.1
MATR3P43243 SEC22A-205ENST00000477063 759 ntTSL 514.39□□□□□ -0.112e-6■■■□□ 19.1
MATR3P43243 PDCD6IP-206ENST00000457054 5962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.21e-6■■■□□ 19.1
MATR3P43243 PPARGC1A-205ENST00000507342 359 ntTSL 312.8□□□□□ -0.368e-7■■■□□ 19.1
MATR3P43243 PPARGC1A-215ENST00000515534 433 ntTSL 510.93□□□□□ -0.668e-7■■■□□ 19.1
MATR3P43243 PPARGC1A-216ENST00000612355 936 ntTSL 5 BASIC10.59□□□□□ -0.718e-7■■■□□ 19.1
MATR3P43243 PIBF1-201ENST00000326291 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.712e-6■■■□□ 19.1
MATR3P43243 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.731e-6■■■□□ 19.1
MATR3P43243 PIBF1-207ENST00000615625 1098 ntTSL 1 (best) BASIC9.83□□□□□ -0.842e-6■■■□□ 19.1
MATR3P43243 PPARGC1A-218ENST00000617484 1026 ntTSL 5 BASIC9.76□□□□□ -0.858e-7■■■□□ 19.1
MATR3P43243 SEC22A-210ENST00000492595 972 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.862e-6■■■□□ 19.1
MATR3P43243 PPARGC1A-211ENST00000513205 1432 ntTSL 1 (best)9.22□□□□□ -0.938e-7■■■□□ 19.1
MATR3P43243 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC8.75□□□□□ -1.012e-6■■■□□ 19.1
MATR3P43243 PPARGC1A-204ENST00000506055 2627 ntTSL 1 (best)8.46□□□□□ -1.058e-7■■■□□ 19.1
MATR3P43243 ETFA-210ENST00000559973 804 ntTSL 38.33□□□□□ -1.083e-6■■■□□ 19.1
MATR3P43243 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC8.25□□□□□ -1.098e-7■■■□□ 19.1
MATR3P43243 PPARGC1A-209ENST00000509702 2704 ntTSL 57.05□□□□□ -1.288e-7■■■□□ 19.1
MATR3P43243 ETFA-212ENST00000560179 650 ntTSL 26.66□□□□□ -1.343e-6■■■□□ 19.1
MATR3P43243 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.352e-6■■■□□ 19.1
MATR3P43243 DCBLD2-207ENST00000479144 692 ntTSL 26.56□□□□□ -1.361e-6■■■□□ 19.1
MATR3P43243 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.378e-7■■■□□ 19.1
MATR3P43243 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.43□□□□□ -1.382e-6■■■□□ 19.1
MATR3P43243 SEC22A-204ENST00000473494 1011 ntTSL 36.05□□□□□ -1.442e-6■■■□□ 19.1
MATR3P43243 DCBLD2-204ENST00000460008 418 ntTSL 35.71□□□□□ -1.51e-6■■■□□ 19.1
MATR3P43243 PPARGC1A-207ENST00000508380 576 ntTSL 44.99□□□□□ -1.618e-7■■■□□ 19.1
MATR3P43243 PPARGC1A-210ENST00000512169 550 ntTSL 44.66□□□□□ -1.668e-7■■■□□ 19.1
MATR3P43243 PPARGC1A-208ENST00000509642 1391 ntTSL 24.3□□□□□ -1.728e-7■■■□□ 19.1
MATR3P43243 ETFA-204ENST00000557975 1086 ntTSL 34.05□□□□□ -1.763e-6■■■□□ 19.1
MATR3P43243 ETFA-220ENST00000565910 609 ntTSL 33.74□□□□□ -1.813e-6■■■□□ 19.1
MATR3P43243 PIBF1-206ENST00000492803 395 ntTSL 33.3□□□□□ -1.882e-6■■■□□ 19.1
MATR3P43243 NUBPL-202ENST00000418681 1804 ntTSL 211.8□□□□□ -0.522e-6■■■□□ 19.1
MATR3P43243 PTCHD4-201ENST00000339488 2850 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.684e-7■■■□□ 19.1
MATR3P43243 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.662e-10■■■□□ 19.1
MATR3P43243 USB1-212ENST00000566082 3888 ntTSL 212.05□□□□□ -0.482e-10■■■□□ 19.1
MATR3P43243 ZNF292-208ENST00000518845 277 ntTSL 322.72■■□□□ 1.234e-7■■■□□ 19.1
MATR3P43243 ZNF292-207ENST00000496806 770 ntTSL 315.49■□□□□ 0.074e-7■■■□□ 19.1
MATR3P43243 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.054e-7■■■□□ 19.1
MATR3P43243 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.254e-7■■■□□ 19.1
MATR3P43243 EIF4G3-206ENST00000411888 1122 ntTSL 528.32■■■□□ 2.123e-6■■■□□ 19.1
MATR3P43243 EIF4G3-208ENST00000438975 1270 ntTSL 522.37■■□□□ 1.173e-6■■■□□ 19.1
MATR3P43243 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC21.13■□□□□ 0.973e-6■■■□□ 19.1
MATR3P43243 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.683e-6■■■□□ 19.1
MATR3P43243 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.663e-6■■■□□ 19.1
MATR3P43243 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.293e-6■■■□□ 19.1
MATR3P43243 EIF4G3-202ENST00000356916 2179 ntTSL 1 (best) BASIC9.95□□□□□ -0.823e-6■■■□□ 19.1
MATR3P43243 PRRC2B-202ENST00000357304 11042 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.389e-8■■■□□ 19.1
MATR3P43243 ZMYND8-202ENST00000311275 5362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.383e-7■■■□□ 19.1
MATR3P43243 ZMYND8-217ENST00000536340 5273 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.473e-7■■■□□ 19.1
MATR3P43243 ZMYND8-205ENST00000360911 4991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.533e-7■■■□□ 19.1
MATR3P43243 ZMYND8-220ENST00000617418 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.623e-7■■■□□ 19.1
MATR3P43243 ZMYND8-204ENST00000355972 5542 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.633e-7■■■□□ 19.1
MATR3P43243 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.793e-7■■■□□ 19.1
MATR3P43243 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.83e-7■■■□□ 19.1
MATR3P43243 ZMYND8-213ENST00000461685 3567 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.833e-7■■■□□ 19.1
MATR3P43243 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.853e-7■■■□□ 19.1
MATR3P43243 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.863e-7■■■□□ 19.1
MATR3P43243 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.913e-7■■■□□ 19.1
Retrieved 100 of 16,209 protein–RNA pairs in 125.9 ms