RNA–Protein interactions for RNA: ENST00000509702.5

PPARGC1A-209, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 5

Gene PPARGC1A, Length 2,704 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-209ENST00000509702 NISCHQ9Y2I1 1504 aa13.73□□□□□ -0.21
PPARGC1A-209ENST00000509702 CCDC180Q9P1Z9 1646 aa12.3□□□□□ -0.44
PPARGC1A-209ENST00000509702 ABCC9O60706 1549 aa12.03□□□□□ -0.48
PPARGC1A-209ENST00000509702 SHROOM4Q9ULL8 1493 aa11.81□□□□□ -0.52
PPARGC1A-209ENST00000509702 DCAF8L2P0C7V8 631 aa11.78□□□□□ -0.52
PPARGC1A-209ENST00000509702 RB1CC1Q8TDY2 1594 aa11.58□□□□□ -0.56
PPARGC1A-209ENST00000509702 NACADO15069 1562 aa11.56□□□□□ -0.56
PPARGC1A-209ENST00000509702 MYO15BQ96JP2 1530 aa11.51□□□□□ -0.57
PPARGC1A-209ENST00000509702 SUPT5HO00267 1087 aaKnown RBP11.47□□□□□ -0.57
PPARGC1A-209ENST00000509702 ZCCHC6Q5VYS8 1495 aaKnown RBP11.44□□□□□ -0.58
PPARGC1A-209ENST00000509702 DCAF1Q9Y4B6 1507 aa11.41□□□□□ -0.58
PPARGC1A-209ENST00000509702 UNC13AQ9UPW8 1703 aa11.36□□□□□ -0.59
PPARGC1A-209ENST00000509702 BICRAQ9NZM4 1560 aa11.28□□□□□ -0.6
PPARGC1A-209ENST00000509702 PABPN1Q86U42 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
PPARGC1A-209ENST00000509702 DNAJC5BQ9UF47 199 aa11.15□□□□□ -0.62
PPARGC1A-209ENST00000509702 SCRIBQ14160 1630 aa11.14□□□□□ -0.63
PPARGC1A-209ENST00000509702 EIF4G1Q04637 1599 aaKnown RBP10.95□□□□□ -0.66
PPARGC1A-209ENST00000509702 CC2D2AQ9P2K1 1620 aa10.93□□□□□ -0.66
PPARGC1A-209ENST00000509702 CHIC1Q5VXU3 224 aa10.86□□□□□ -0.67
PPARGC1A-209ENST00000509702 CECR2Q9BXF3 1484 aa10.84□□□□□ -0.67
PPARGC1A-209ENST00000509702 EHMT2Q96KQ7 1210 aa10.8□□□□□ -0.68
PPARGC1A-209ENST00000509702 LOC105371045A0A1W2PR82 267 aa10.74□□□□□ -0.69
PPARGC1A-209ENST00000509702 FAM9AQ8IZU1 332 aaPredicted RBP10.7□□□□□ -0.7
PPARGC1A-209ENST00000509702 SMARCA4P51532 1647 aa10.69□□□□□ -0.7
PPARGC1A-209ENST00000509702 RSF1Q96T23 1441 aaPredicted RBP10.67□□□□□ -0.7
PPARGC1A-209ENST00000509702 NCAPD3P42695 1498 aa10.67□□□□□ -0.7
PPARGC1A-209ENST00000509702 ATAD2BQ9ULI0 1458 aa10.65□□□□□ -0.71
PPARGC1A-209ENST00000509702 BAZ1AQ9NRL2 1556 aaPredicted RBP10.64□□□□□ -0.71
PPARGC1A-209ENST00000509702 PEG3Q9GZU2 1588 aa10.63□□□□□ -0.71
PPARGC1A-209ENST00000509702 HMGXB3Q12766 1538 aa10.62□□□□□ -0.71
PPARGC1A-209ENST00000509702 SMARCA2P51531 1590 aa10.62□□□□□ -0.71
PPARGC1A-209ENST00000509702 MROH2BQ7Z745 1585 aa10.59□□□□□ -0.71
PPARGC1A-209ENST00000509702 TRIM41Q8WV44 630 aa10.54□□□□□ -0.72
PPARGC1A-209ENST00000509702 WIZO95785 1651 aa10.54□□□□□ -0.72
PPARGC1A-209ENST00000509702 BAZ1BQ9UIG0 1483 aaKnown RBP10.52□□□□□ -0.73
PPARGC1A-209ENST00000509702 PCGF6Q9BYE7 350 aa10.48□□□□□ -0.73
PPARGC1A-209ENST00000509702 PPARGC1BQ86YN6 1023 aaKnown RBP10.43□□□□□ -0.74
PPARGC1A-209ENST00000509702 DNAJC5Q9H3Z4 198 aa10.41□□□□□ -0.74
PPARGC1A-209ENST00000509702 NESP48681 1621 aa10.4□□□□□ -0.74
PPARGC1A-209ENST00000509702 LAMC3Q9Y6N6 1575 aa10.4□□□□□ -0.75
PPARGC1A-209ENST00000509702 CUX2O14529 1486 aa10.37□□□□□ -0.75
PPARGC1A-209ENST00000509702 ERCC6Q03468 1493 aa10.36□□□□□ -0.75
PPARGC1A-209ENST00000509702 TOP2AP11388 1531 aaKnown RBP10.35□□□□□ -0.75
PPARGC1A-209ENST00000509702 TTBK1Q5TCY1 1321 aaPredicted RBP10.35□□□□□ -0.75
PPARGC1A-209ENST00000509702 THOC2Q8NI27 1593 aaKnown RBP10.34□□□□□ -0.75
PPARGC1A-209ENST00000509702 CADPSQ9ULU8 1353 aa10.31□□□□□ -0.76
PPARGC1A-209ENST00000509702 KIF21AQ7Z4S6 1674 aa10.31□□□□□ -0.76
PPARGC1A-209ENST00000509702 ABCC8Q09428 1581 aa10.31□□□□□ -0.76
PPARGC1A-209ENST00000509702 CCDC88BA6NC98 1476 aa10.29□□□□□ -0.76
PPARGC1A-209ENST00000509702 PDS5BQ9NTI5 1447 aa10.29□□□□□ -0.76
PPARGC1A-209ENST00000509702 CFTRP13569 1480 aa10.26□□□□□ -0.77
PPARGC1A-209ENST00000509702 RANGAP1P46060 587 aaPredicted RBP10.26□□□□□ -0.77
PPARGC1A-209ENST00000509702 WDR62O43379 1518 aa10.23□□□□□ -0.77
PPARGC1A-209ENST00000509702 MRC2Q9UBG0 1479 aa10.22□□□□□ -0.77
PPARGC1A-209ENST00000509702 PRDM2Q13029 1718 aa10.21□□□□□ -0.78
PPARGC1A-209ENST00000509702 FANCD2Q9BXW9 1451 aa10.2□□□□□ -0.78
PPARGC1A-209ENST00000509702 CEP164Q9UPV0 1460 aa10.19□□□□□ -0.78
PPARGC1A-209ENST00000509702 RUSC2Q8N2Y8 1516 aa10.18□□□□□ -0.78
PPARGC1A-209ENST00000509702 SOGA1O94964 1423 aa10.17□□□□□ -0.78
PPARGC1A-209ENST00000509702 UBTFP17480 764 aaKnown RBP10.13□□□□□ -0.79
PPARGC1A-209ENST00000509702 URB2Q14146 1524 aaKnown RBP10.13□□□□□ -0.79
PPARGC1A-209ENST00000509702 HRCP23327 699 aa10.12□□□□□ -0.79
PPARGC1A-209ENST00000509702 TRIM26Q12899 539 aaPredicted RBP10.09□□□□□ -0.79
PPARGC1A-209ENST00000509702 CSRNP3Q8WYN3 585 aa10.05□□□□□ -0.8
PPARGC1A-209ENST00000509702 TOPBP1Q92547 1522 aa10.04□□□□□ -0.8
PPARGC1A-209ENST00000509702 WRNQ14191 1432 aaPredicted RBP eCLIP10.03□□□□□ -0.8
PPARGC1A-209ENST00000509702 DNMBPQ6XZF7 1577 aa10.03□□□□□ -0.8
PPARGC1A-209ENST00000509702 SYNJ1O43426 1573 aa10□□□□□ -0.81
PPARGC1A-209ENST00000509702 IFT140Q96RY7 1462 aa10□□□□□ -0.81
PPARGC1A-209ENST00000509702 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.98□□□□□ -0.81
PPARGC1A-209ENST00000509702 TARBP1Q13395 1621 aaKnown RBP9.97□□□□□ -0.81
PPARGC1A-209ENST00000509702 ZNF608Q9ULD9 1512 aaPredicted RBP9.95□□□□□ -0.82
PPARGC1A-209ENST00000509702 POLA1P09884 1462 aaPredicted RBP9.94□□□□□ -0.82
PPARGC1A-209ENST00000509702 EIF4G3O43432 1585 aaKnown RBP9.94□□□□□ -0.82
PPARGC1A-209ENST00000509702 CUX1P39880 1505 aa9.93□□□□□ -0.82
PPARGC1A-209ENST00000509702 CEP162Q5TB80 1403 aa9.93□□□□□ -0.82
PPARGC1A-209ENST00000509702 WDR97A6NE52 1622 aa9.91□□□□□ -0.82
PPARGC1A-209ENST00000509702 FGD5Q6ZNL6 1462 aa9.89□□□□□ -0.83
PPARGC1A-209ENST00000509702 RAPGEF2Q9Y4G8 1499 aa9.88□□□□□ -0.83
PPARGC1A-209ENST00000509702 RAD54L2Q9Y4B4 1467 aa9.87□□□□□ -0.83
PPARGC1A-209ENST00000509702 HNRNPUL2Q1KMD3 747 aaKnown RBP9.86□□□□□ -0.83
PPARGC1A-209ENST00000509702 AQRO60306 1485 aaKnown RBP eCLIP9.85□□□□□ -0.836e-7■■■□□ 15.2
PPARGC1A-209ENST00000509702 P3H3Q8IVL6 736 aa9.84□□□□□ -0.83
PPARGC1A-209ENST00000509702 BIVM-ERCC5R4GMW8 1640 aa9.84□□□□□ -0.83
PPARGC1A-209ENST00000509702 TNIKQ9UKE5 1360 aa9.84□□□□□ -0.83
PPARGC1A-209ENST00000509702 CCER1Q8TC90 406 aaPredicted RBP9.84□□□□□ -0.84
PPARGC1A-209ENST00000509702 TOP2BQ02880 1626 aa9.83□□□□□ -0.84
PPARGC1A-209ENST00000509702 OSCARQ8IYS5 282 aa9.83□□□□□ -0.84
PPARGC1A-209ENST00000509702 ABCA10Q8WWZ4 1543 aa9.82□□□□□ -0.84
PPARGC1A-209ENST00000509702 CHD1O14646 1710 aa9.82□□□□□ -0.84
PPARGC1A-209ENST00000509702 ABCA5Q8WWZ7 1642 aa9.82□□□□□ -0.84
PPARGC1A-209ENST00000509702 GOLGA3Q08378 1498 aa9.82□□□□□ -0.84
PPARGC1A-209ENST00000509702 ATP1B4Q9UN42 357 aaPredicted RBP9.81□□□□□ -0.84
PPARGC1A-209ENST00000509702 TDRD9Q8NDG6 1382 aaKnown RBP9.8□□□□□ -0.84
PPARGC1A-209ENST00000509702 CLIP1P30622 1438 aa9.79□□□□□ -0.84
PPARGC1A-209ENST00000509702 MAGI1Q96QZ7 1491 aaPredicted RBP9.79□□□□□ -0.84
PPARGC1A-209ENST00000509702 PBRM1Q86U86 1689 aa9.79□□□□□ -0.84
PPARGC1A-209ENST00000509702 GRIN2BQ13224 1484 aa9.78□□□□□ -0.84
PPARGC1A-209ENST00000509702 SNAPC4Q5SXM2 1469 aa9.78□□□□□ -0.84
PPARGC1A-209ENST00000509702 ITGAEP38570 1179 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms