RNA–Protein interactions for RNA: ENST00000513205.5

PPARGC1A-211, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 1,432 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-211ENST00000513205 AEBP2Q6ZN18 517 aaPredicted RBP26.31■■□□□ 1.8
PPARGC1A-211ENST00000513205 CHIC1Q5VXU3 224 aa24.73■■□□□ 1.55
PPARGC1A-211ENST00000513205 SENP3Q9H4L4 574 aaPredicted RBP22.45■■□□□ 1.18
PPARGC1A-211ENST00000513205 PHF23Q9BUL5 403 aaPredicted RBP22.16■■□□□ 1.14
PPARGC1A-211ENST00000513205 FOXD1Q16676 465 aa20.97■□□□□ 0.95
PPARGC1A-211ENST00000513205 MSH5O43196 834 aa19.7■□□□□ 0.74
PPARGC1A-211ENST00000513205 POTEDQ86YR6 584 aa19.68■□□□□ 0.74
PPARGC1A-211ENST00000513205 PLPPR3Q6T4P5 718 aa19.63■□□□□ 0.73
PPARGC1A-211ENST00000513205 PIAS4Q8N2W9 510 aaPredicted RBP19.51■□□□□ 0.71
PPARGC1A-211ENST00000513205 PPP6R1Q9UPN7 881 aa19.45■□□□□ 0.7
PPARGC1A-211ENST00000513205 ADRA2BP18089 450 aa19.34■□□□□ 0.69
PPARGC1A-211ENST00000513205 NISCHQ9Y2I1 1504 aa19.01■□□□□ 0.63
PPARGC1A-211ENST00000513205 MAPK8IP2Q13387 824 aaPredicted RBP17.86■□□□□ 0.45
PPARGC1A-211ENST00000513205 DMRT2Q9Y5R5 561 aa17.77■□□□□ 0.44
PPARGC1A-211ENST00000513205 SCAF1Q9H7N4 1312 aaKnown RBP17.7■□□□□ 0.42
PPARGC1A-211ENST00000513205 PPP4R3CPQ6ZMV5 832 aa17.19■□□□□ 0.34
PPARGC1A-211ENST00000513205 CACNB1Q02641 598 aaPredicted RBP17.06■□□□□ 0.32
PPARGC1A-211ENST00000513205 HOXD11P31277 338 aaPredicted RBP17.04■□□□□ 0.32
PPARGC1A-211ENST00000513205 DCAF8L1A6NGE4 600 aa17.02■□□□□ 0.31
PPARGC1A-211ENST00000513205 CNKSR2Q8WXI2 1034 aa16.93■□□□□ 0.3
PPARGC1A-211ENST00000513205 RNF216Q9NWF9 866 aaPredicted RBP16.84■□□□□ 0.29
PPARGC1A-211ENST00000513205 RNF39Q9H2S5 420 aa16.8■□□□□ 0.28
PPARGC1A-211ENST00000513205 CCDC180Q9P1Z9 1646 aa16.62■□□□□ 0.25
PPARGC1A-211ENST00000513205 C1QBPQ07021 282 aaKnown RBP16.55■□□□□ 0.24
PPARGC1A-211ENST00000513205 DNAJC5BQ9UF47 199 aa16.53■□□□□ 0.24
PPARGC1A-211ENST00000513205 NCBP3Q53F19 620 aaKnown RBP16.44■□□□□ 0.22
PPARGC1A-211ENST00000513205 NPM3O75607 178 aaKnown RBP16.2■□□□□ 0.18
PPARGC1A-211ENST00000513205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.2■□□□□ 0.185e-7■■□□□ 12.1
PPARGC1A-211ENST00000513205 ZCCHC6Q5VYS8 1495 aaKnown RBP16.04■□□□□ 0.16
PPARGC1A-211ENST00000513205 DCAF1Q9Y4B6 1507 aa15.87■□□□□ 0.13
PPARGC1A-211ENST00000513205 U3KPZ7 1027 aaPredicted RBP15.84■□□□□ 0.13
PPARGC1A-211ENST00000513205 SPINK5Q9NQ38 1064 aaPredicted RBP15.69■□□□□ 0.1
PPARGC1A-211ENST00000513205 MYO15BQ96JP2 1530 aa15.67■□□□□ 0.1
PPARGC1A-211ENST00000513205 KCNA4P22459 653 aa15.67■□□□□ 0.1
PPARGC1A-211ENST00000513205 DSG3P32926 999 aa15.66■□□□□ 0.1
PPARGC1A-211ENST00000513205 CAPN15O75808 1086 aa15.65■□□□□ 0.1
PPARGC1A-211ENST00000513205 SLC4A2P04920 1241 aa15.56■□□□□ 0.08
PPARGC1A-211ENST00000513205 NACADO15069 1562 aa15.41■□□□□ 0.06
PPARGC1A-211ENST00000513205 DCAF8L2P0C7V8 631 aa15.39■□□□□ 0.05
PPARGC1A-211ENST00000513205 SHROOM4Q9ULL8 1493 aa15.36■□□□□ 0.05
PPARGC1A-211ENST00000513205 TRHP20396 242 aaPredicted RBP15.35■□□□□ 0.05
PPARGC1A-211ENST00000513205 APLP2Q06481 763 aa15.35■□□□□ 0.05
PPARGC1A-211ENST00000513205 POTEHQ6S545 545 aa15.35■□□□□ 0.05
PPARGC1A-211ENST00000513205 ZNF219Q9P2Y4 722 aaPredicted RBP15.31■□□□□ 0.04
PPARGC1A-211ENST00000513205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.3■□□□□ 0.04
PPARGC1A-211ENST00000513205 HNRNPUL2Q1KMD3 747 aaKnown RBP15.3■□□□□ 0.04
PPARGC1A-211ENST00000513205 ABCC9O60706 1549 aa15.29■□□□□ 0.04
PPARGC1A-211ENST00000513205 ABCB7O75027 752 aa15.26■□□□□ 0.03
PPARGC1A-211ENST00000513205 RB1CC1Q8TDY2 1594 aa15.21■□□□□ 0.03
PPARGC1A-211ENST00000513205 SAMD1Q6SPF0 538 aaPredicted RBP15.2■□□□□ 0.02
PPARGC1A-211ENST00000513205 SCRIBQ14160 1630 aa15.09■□□□□ 0.01
PPARGC1A-211ENST00000513205 MYCNP04198 464 aaPredicted RBP14.98□□□□□ -0.01
PPARGC1A-211ENST00000513205 RBM42Q9BTD8 480 aaKnown RBP14.92□□□□□ -0.02
PPARGC1A-211ENST00000513205 SUPT5HO00267 1087 aaKnown RBP14.91□□□□□ -0.02
PPARGC1A-211ENST00000513205 POLA2Q14181 598 aa14.91□□□□□ -0.02
PPARGC1A-211ENST00000513205 RSF1Q96T23 1441 aaPredicted RBP14.76□□□□□ -0.05
PPARGC1A-211ENST00000513205 UNC13AQ9UPW8 1703 aa14.75□□□□□ -0.05
PPARGC1A-211ENST00000513205 BAZ1AQ9NRL2 1556 aaPredicted RBP14.73□□□□□ -0.05
PPARGC1A-211ENST00000513205 SLC4A1APQ9BWU0 796 aaKnown RBP14.73□□□□□ -0.05
PPARGC1A-211ENST00000513205 CHRDL2Q6WN34 429 aa14.69□□□□□ -0.06
PPARGC1A-211ENST00000513205 FOXD4L1Q9NU39 408 aa14.69□□□□□ -0.06
PPARGC1A-211ENST00000513205 ATF5Q9Y2D1 282 aaPredicted RBP14.68□□□□□ -0.06
PPARGC1A-211ENST00000513205 BICRAQ9NZM4 1560 aa14.63□□□□□ -0.07
PPARGC1A-211ENST00000513205 CECR2Q9BXF3 1484 aa14.62□□□□□ -0.07
PPARGC1A-211ENST00000513205 MROH2BQ7Z745 1585 aa14.6□□□□□ -0.07
PPARGC1A-211ENST00000513205 SMARCA4P51532 1647 aa14.57□□□□□ -0.08
PPARGC1A-211ENST00000513205 AKT1S1Q96B36 256 aa14.55□□□□□ -0.08
PPARGC1A-211ENST00000513205 ZBTB12Q9Y330 459 aaPredicted RBP14.54□□□□□ -0.08
PPARGC1A-211ENST00000513205 PEG3Q9GZU2 1588 aa14.49□□□□□ -0.09
PPARGC1A-211ENST00000513205 WIZO95785 1651 aa14.47□□□□□ -0.09
PPARGC1A-211ENST00000513205 TOP2AP11388 1531 aaKnown RBP14.47□□□□□ -0.09
PPARGC1A-211ENST00000513205 REM2Q8IYK8 340 aaPredicted RBP14.41□□□□□ -0.1
PPARGC1A-211ENST00000513205 ZBTB22O15209 634 aa14.41□□□□□ -0.1
PPARGC1A-211ENST00000513205 OSCARQ8IYS5 282 aa14.4□□□□□ -0.1
PPARGC1A-211ENST00000513205 SMARCA2P51531 1590 aa14.38□□□□□ -0.11
PPARGC1A-211ENST00000513205 PABPN1Q86U42 306 aaKnown RBP eCLIP14.36□□□□□ -0.11
PPARGC1A-211ENST00000513205 PIP4P2Q8N4L2 257 aa14.31□□□□□ -0.12
PPARGC1A-211ENST00000513205 ATXN8OSP0DMR3 200 aa14.29□□□□□ -0.12
PPARGC1A-211ENST00000513205 SP7Q8TDD2 431 aaPredicted RBP14.28□□□□□ -0.12
PPARGC1A-211ENST00000513205 ATAD2BQ9ULI0 1458 aa14.27□□□□□ -0.13
PPARGC1A-211ENST00000513205 EIF4G1Q04637 1599 aaKnown RBP14.25□□□□□ -0.13
PPARGC1A-211ENST00000513205 HMGXB3Q12766 1538 aa14.24□□□□□ -0.13
PPARGC1A-211ENST00000513205 PITPNM1O00562 1244 aa14.24□□□□□ -0.13
PPARGC1A-211ENST00000513205 CCDC88BA6NC98 1476 aa14.22□□□□□ -0.13
PPARGC1A-211ENST00000513205 BAZ1BQ9UIG0 1483 aaKnown RBP14.22□□□□□ -0.13
PPARGC1A-211ENST00000513205 FXR2P51116 673 aaKnown RBP eCLIP14.21□□□□□ -0.13
PPARGC1A-211ENST00000513205 NCAPD3P42695 1498 aa14.18□□□□□ -0.14
PPARGC1A-211ENST00000513205 TRIM41Q8WV44 630 aa14.13□□□□□ -0.15
PPARGC1A-211ENST00000513205 HAX1O00165 279 aa14.11□□□□□ -0.15
PPARGC1A-211ENST00000513205 SPDYE2BA6NHP3 402 aa14.1□□□□□ -0.15
PPARGC1A-211ENST00000513205 SPDYE6P0CI01 402 aa14.1□□□□□ -0.15
PPARGC1A-211ENST00000513205 SPDYE2Q495Y8 402 aa14.1□□□□□ -0.15
PPARGC1A-211ENST00000513205 FBLN2P98095 1184 aa14.09□□□□□ -0.15
PPARGC1A-211ENST00000513205 MKRN4PQ13434 485 aaPredicted RBP13.98□□□□□ -0.17
PPARGC1A-211ENST00000513205 EEA1Q15075 1411 aa13.98□□□□□ -0.17
PPARGC1A-211ENST00000513205 EVX2Q03828 476 aa13.95□□□□□ -0.18
PPARGC1A-211ENST00000513205 WRNQ14191 1432 aaPredicted RBP eCLIP13.94□□□□□ -0.18
PPARGC1A-211ENST00000513205 CC2D2AQ9P2K1 1620 aa13.92□□□□□ -0.18
PPARGC1A-211ENST00000513205 ABCC8Q09428 1581 aa13.91□□□□□ -0.18
PPARGC1A-211ENST00000513205 CFTRP13569 1480 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms