RNA–Protein interactions for RNA: ENST00000515534.5

PPARGC1A-215, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 5

Gene PPARGC1A, Length 433 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-215ENST00000515534 AEBP2Q6ZN18 517 aaPredicted RBP31.14■■■□□ 2.58
PPARGC1A-215ENST00000515534 CHIC1Q5VXU3 224 aa30.09■■■□□ 2.41
PPARGC1A-215ENST00000515534 PHF23Q9BUL5 403 aaPredicted RBP26.54■■□□□ 1.84
PPARGC1A-215ENST00000515534 SENP3Q9H4L4 574 aaPredicted RBP26.28■■□□□ 1.8
PPARGC1A-215ENST00000515534 FOXD1Q16676 465 aa24.52■■□□□ 1.52
PPARGC1A-215ENST00000515534 NISCHQ9Y2I1 1504 aa24.35■■□□□ 1.49
PPARGC1A-215ENST00000515534 PLPPR3Q6T4P5 718 aa24.23■■□□□ 1.47
PPARGC1A-215ENST00000515534 PPP6R1Q9UPN7 881 aa23.47■■□□□ 1.35
PPARGC1A-215ENST00000515534 ADRA2BP18089 450 aa23.33■■□□□ 1.33
PPARGC1A-215ENST00000515534 PIAS4Q8N2W9 510 aaPredicted RBP22.94■■□□□ 1.26
PPARGC1A-215ENST00000515534 MSH5O43196 834 aa22.58■■□□□ 1.21
PPARGC1A-215ENST00000515534 CCDC180Q9P1Z9 1646 aa21.66■■□□□ 1.06
PPARGC1A-215ENST00000515534 PPP4R3CPQ6ZMV5 832 aa21.36■■□□□ 1.01
PPARGC1A-215ENST00000515534 MAPK8IP2Q13387 824 aaPredicted RBP21.27■■□□□ 1
PPARGC1A-215ENST00000515534 SCAF1Q9H7N4 1312 aaKnown RBP21.18■□□□□ 0.98
PPARGC1A-215ENST00000515534 POTEDQ86YR6 584 aa21.06■□□□□ 0.96
PPARGC1A-215ENST00000515534 ABCC9O60706 1549 aa21.03■□□□□ 0.96
PPARGC1A-215ENST00000515534 DMRT2Q9Y5R5 561 aa21.02■□□□□ 0.96
PPARGC1A-215ENST00000515534 CNKSR2Q8WXI2 1034 aa20.79■□□□□ 0.92
PPARGC1A-215ENST00000515534 KCNA4P22459 653 aa20.64■□□□□ 0.89
PPARGC1A-215ENST00000515534 NCBP3Q53F19 620 aaKnown RBP20.59■□□□□ 0.89
PPARGC1A-215ENST00000515534 HOXD11P31277 338 aaPredicted RBP20.54■□□□□ 0.88
PPARGC1A-215ENST00000515534 NPM3O75607 178 aaKnown RBP20.48■□□□□ 0.87
PPARGC1A-215ENST00000515534 RNF216Q9NWF9 866 aaPredicted RBP20.48■□□□□ 0.87
PPARGC1A-215ENST00000515534 ZCCHC6Q5VYS8 1495 aaKnown RBP20.35■□□□□ 0.85
PPARGC1A-215ENST00000515534 NACADO15069 1562 aa20.31■□□□□ 0.84
PPARGC1A-215ENST00000515534 RB1CC1Q8TDY2 1594 aa20.3■□□□□ 0.84
PPARGC1A-215ENST00000515534 MYO15BQ96JP2 1530 aa20.26■□□□□ 0.83
PPARGC1A-215ENST00000515534 DCAF1Q9Y4B6 1507 aa20.2■□□□□ 0.82
PPARGC1A-215ENST00000515534 DCAF8L2P0C7V8 631 aa20.14■□□□□ 0.81
PPARGC1A-215ENST00000515534 DNAJC5BQ9UF47 199 aa20.09■□□□□ 0.81
PPARGC1A-215ENST00000515534 UNC13AQ9UPW8 1703 aa19.86■□□□□ 0.77
PPARGC1A-215ENST00000515534 DCAF8L1A6NGE4 600 aa19.84■□□□□ 0.77
PPARGC1A-215ENST00000515534 BICRAQ9NZM4 1560 aa19.71■□□□□ 0.75
PPARGC1A-215ENST00000515534 SCRIBQ14160 1630 aa19.71■□□□□ 0.75
PPARGC1A-215ENST00000515534 PABPN1Q86U42 306 aaKnown RBP eCLIP19.61■□□□□ 0.73
PPARGC1A-215ENST00000515534 SHROOM4Q9ULL8 1493 aa19.55■□□□□ 0.72
PPARGC1A-215ENST00000515534 SLC4A1APQ9BWU0 796 aaKnown RBP19.5■□□□□ 0.71
PPARGC1A-215ENST00000515534 SLC4A2P04920 1241 aa19.47■□□□□ 0.71
PPARGC1A-215ENST00000515534 RNF39Q9H2S5 420 aa19.44■□□□□ 0.7
PPARGC1A-215ENST00000515534 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.33■□□□□ 0.689e-7■■□□□ 14.3
PPARGC1A-215ENST00000515534 U3KPZ7 1027 aaPredicted RBP19.19■□□□□ 0.66
PPARGC1A-215ENST00000515534 EIF4G1Q04637 1599 aaKnown RBP19.17■□□□□ 0.66
PPARGC1A-215ENST00000515534 C1QBPQ07021 282 aaKnown RBP19.11■□□□□ 0.65
PPARGC1A-215ENST00000515534 ZBTB22O15209 634 aa19.09■□□□□ 0.65
PPARGC1A-215ENST00000515534 CC2D2AQ9P2K1 1620 aa19.05■□□□□ 0.64
PPARGC1A-215ENST00000515534 FOXD4L1Q9NU39 408 aa19■□□□□ 0.63
PPARGC1A-215ENST00000515534 CECR2Q9BXF3 1484 aa18.94■□□□□ 0.62
PPARGC1A-215ENST00000515534 CACNB1Q02641 598 aaPredicted RBP18.91■□□□□ 0.62
PPARGC1A-215ENST00000515534 SMARCA4P51532 1647 aa18.89■□□□□ 0.62
PPARGC1A-215ENST00000515534 BAZ1AQ9NRL2 1556 aaPredicted RBP18.88■□□□□ 0.61
PPARGC1A-215ENST00000515534 MYCNP04198 464 aaPredicted RBP18.84■□□□□ 0.61
PPARGC1A-215ENST00000515534 MROH2BQ7Z745 1585 aa18.76■□□□□ 0.59
PPARGC1A-215ENST00000515534 ATAD2BQ9ULI0 1458 aa18.76■□□□□ 0.59
PPARGC1A-215ENST00000515534 SMARCA2P51531 1590 aa18.75■□□□□ 0.59
PPARGC1A-215ENST00000515534 PEG3Q9GZU2 1588 aa18.74■□□□□ 0.59
PPARGC1A-215ENST00000515534 NCAPD3P42695 1498 aa18.73■□□□□ 0.59
PPARGC1A-215ENST00000515534 CSRNP3Q8WYN3 585 aa18.72■□□□□ 0.59
PPARGC1A-215ENST00000515534 SPINK5Q9NQ38 1064 aaPredicted RBP18.7■□□□□ 0.58
PPARGC1A-215ENST00000515534 HMGXB3Q12766 1538 aa18.69■□□□□ 0.58
PPARGC1A-215ENST00000515534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.68■□□□□ 0.58
PPARGC1A-215ENST00000515534 HNRNPUL2Q1KMD3 747 aaKnown RBP18.68■□□□□ 0.58
PPARGC1A-215ENST00000515534 SAMD1Q6SPF0 538 aaPredicted RBP18.64■□□□□ 0.57
PPARGC1A-215ENST00000515534 EHMT2Q96KQ7 1210 aa18.62■□□□□ 0.57
PPARGC1A-215ENST00000515534 BAZ1BQ9UIG0 1483 aaKnown RBP18.59■□□□□ 0.57
PPARGC1A-215ENST00000515534 RSF1Q96T23 1441 aaPredicted RBP18.57■□□□□ 0.56
PPARGC1A-215ENST00000515534 WIZO95785 1651 aa18.56■□□□□ 0.56
PPARGC1A-215ENST00000515534 ATF5Q9Y2D1 282 aaPredicted RBP18.49■□□□□ 0.55
PPARGC1A-215ENST00000515534 APLP2Q06481 763 aa18.48■□□□□ 0.55
PPARGC1A-215ENST00000515534 CAPN15O75808 1086 aa18.46■□□□□ 0.55
PPARGC1A-215ENST00000515534 TOP2AP11388 1531 aaKnown RBP18.4■□□□□ 0.54
PPARGC1A-215ENST00000515534 DSG3P32926 999 aa18.4■□□□□ 0.54
PPARGC1A-215ENST00000515534 ATXN8OSP0DMR3 200 aa18.39■□□□□ 0.53
PPARGC1A-215ENST00000515534 ZNF219Q9P2Y4 722 aaPredicted RBP18.36■□□□□ 0.53
PPARGC1A-215ENST00000515534 TRHP20396 242 aaPredicted RBP18.33■□□□□ 0.52
PPARGC1A-215ENST00000515534 NESP48681 1621 aa18.23■□□□□ 0.51
PPARGC1A-215ENST00000515534 LAMC3Q9Y6N6 1575 aa18.23■□□□□ 0.51
PPARGC1A-215ENST00000515534 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
PPARGC1A-215ENST00000515534 ABCB7O75027 752 aa18.16■□□□□ 0.5
PPARGC1A-215ENST00000515534 CCDC88BA6NC98 1476 aa18.14■□□□□ 0.49
PPARGC1A-215ENST00000515534 CFTRP13569 1480 aa18.11■□□□□ 0.49
PPARGC1A-215ENST00000515534 ERCC6Q03468 1493 aa18.11■□□□□ 0.49
PPARGC1A-215ENST00000515534 PDS5BQ9NTI5 1447 aa18.06■□□□□ 0.48
PPARGC1A-215ENST00000515534 POLA2Q14181 598 aa18.06■□□□□ 0.48
PPARGC1A-215ENST00000515534 KIF21AQ7Z4S6 1674 aa18.06■□□□□ 0.48
PPARGC1A-215ENST00000515534 SUPT5HO00267 1087 aaKnown RBP18.05■□□□□ 0.48
PPARGC1A-215ENST00000515534 PRDM2Q13029 1718 aa18.01■□□□□ 0.47
PPARGC1A-215ENST00000515534 THOC2Q8NI27 1593 aaKnown RBP18■□□□□ 0.47
PPARGC1A-215ENST00000515534 FANCD2Q9BXW9 1451 aa17.97■□□□□ 0.47
PPARGC1A-215ENST00000515534 CUX2O14529 1486 aa17.95■□□□□ 0.46
PPARGC1A-215ENST00000515534 CEP164Q9UPV0 1460 aa17.95■□□□□ 0.46
PPARGC1A-215ENST00000515534 MRC2Q9UBG0 1479 aa17.91■□□□□ 0.46
PPARGC1A-215ENST00000515534 WDR62O43379 1518 aa17.88■□□□□ 0.45
PPARGC1A-215ENST00000515534 URB2Q14146 1524 aaKnown RBP17.8■□□□□ 0.44
PPARGC1A-215ENST00000515534 DNMBPQ6XZF7 1577 aa17.7■□□□□ 0.42
PPARGC1A-215ENST00000515534 TOPBP1Q92547 1522 aa17.7■□□□□ 0.42
PPARGC1A-215ENST00000515534 ABCC8Q09428 1581 aa17.7■□□□□ 0.42
PPARGC1A-215ENST00000515534 MKRN4PQ13434 485 aaPredicted RBP17.69■□□□□ 0.42
PPARGC1A-215ENST00000515534 ZBTB12Q9Y330 459 aaPredicted RBP17.68■□□□□ 0.42
PPARGC1A-215ENST00000515534 CUX1P39880 1505 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms