Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
GDNFP39905 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.61■□□□□ 0.25
GDNFP39905 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GDNFP39905 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
GDNFP39905 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.61■□□□□ 0.25
GDNFP39905 MKRN4P-201ENST00000444706 1521 ntBASIC16.61■□□□□ 0.25
GDNFP39905 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
GDNFP39905 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GDNFP39905 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GDNFP39905 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.61■□□□□ 0.25
GDNFP39905 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
GDNFP39905 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GDNFP39905 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GDNFP39905 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
GDNFP39905 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.61■□□□□ 0.25
GDNFP39905 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.61■□□□□ 0.25
GDNFP39905 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.61■□□□□ 0.25
GDNFP39905 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.61■□□□□ 0.25
GDNFP39905 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.61■□□□□ 0.25
GDNFP39905 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GDNFP39905 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GDNFP39905 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.61■□□□□ 0.25
GDNFP39905 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.61■□□□□ 0.25
GDNFP39905 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
GDNFP39905 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.61■□□□□ 0.25
GDNFP39905 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
GDNFP39905 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GDNFP39905 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GDNFP39905 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GDNFP39905 KRT8P20-201ENST00000423953 1409 ntBASIC16.61■□□□□ 0.25
GDNFP39905 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
GDNFP39905 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.61■□□□□ 0.25
GDNFP39905 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.61■□□□□ 0.25
GDNFP39905 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.6■□□□□ 0.25
GDNFP39905 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDNFP39905 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDNFP39905 AL512353.2-201ENST00000448759 1962 ntBASIC16.6■□□□□ 0.25
GDNFP39905 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDNFP39905 PHGDH-210ENST00000641115 1638 ntBASIC16.6■□□□□ 0.25
GDNFP39905 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDNFP39905 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GDNFP39905 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDNFP39905 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.6■□□□□ 0.25
GDNFP39905 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDNFP39905 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDNFP39905 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GDNFP39905 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.6■□□□□ 0.25
GDNFP39905 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
GDNFP39905 GUSBP6-202ENST00000438529 1198 ntBASIC16.6■□□□□ 0.25
GDNFP39905 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.6■□□□□ 0.25
GDNFP39905 AC090192.1-201ENST00000517740 490 ntBASIC16.6■□□□□ 0.25
GDNFP39905 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.6■□□□□ 0.25
GDNFP39905 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.6■□□□□ 0.25
GDNFP39905 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.6■□□□□ 0.25
GDNFP39905 AL121832.2-201ENST00000610979 668 ntBASIC16.6■□□□□ 0.25
GDNFP39905 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.6■□□□□ 0.25
GDNFP39905 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.6■□□□□ 0.25
GDNFP39905 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDNFP39905 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GDNFP39905 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.6■□□□□ 0.25
GDNFP39905 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GDNFP39905 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDNFP39905 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.6■□□□□ 0.25
GDNFP39905 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDNFP39905 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.6■□□□□ 0.25
GDNFP39905 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDNFP39905 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDNFP39905 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDNFP39905 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDNFP39905 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDNFP39905 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDNFP39905 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDNFP39905 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.59■□□□□ 0.25
GDNFP39905 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.59■□□□□ 0.25
GDNFP39905 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDNFP39905 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.59■□□□□ 0.25
GDNFP39905 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.59■□□□□ 0.25
GDNFP39905 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.59■□□□□ 0.25
GDNFP39905 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.59■□□□□ 0.25
GDNFP39905 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
GDNFP39905 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.59■□□□□ 0.25
GDNFP39905 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GDNFP39905 BX276092.2-201ENST00000417668 665 ntBASIC16.59■□□□□ 0.25
GDNFP39905 NCF1B-203ENST00000435988 1254 ntBASIC16.59■□□□□ 0.25
GDNFP39905 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GDNFP39905 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.59■□□□□ 0.25
GDNFP39905 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.59■□□□□ 0.25
GDNFP39905 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
GDNFP39905 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.59■□□□□ 0.25
GDNFP39905 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.59■□□□□ 0.25
GDNFP39905 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.59■□□□□ 0.25
GDNFP39905 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
GDNFP39905 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.59■□□□□ 0.25
GDNFP39905 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GDNFP39905 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDNFP39905 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDNFP39905 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDNFP39905 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDNFP39905 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDNFP39905 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms