Protein–RNA interactions for Protein: O75533

SF3B1, Splicing factor 3B subunit 1, humanhuman

Known RBP eCLIP

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1O75533 CHN2-212ENST00000433720 546 ntTSL 311.84□□□□□ -0.513e-6■■■■■ 137.9
SF3B1O75533 MPHOSPH10-204ENST00000493360 1584 ntTSL 211.83□□□□□ -0.523e-6■■■■■ 137.9
SF3B1O75533 AC091976.1-204ENST00000503504 492 ntTSL 511.83□□□□□ -0.523e-6■■■■■ 137.9
SF3B1O75533 SIPA1L3-204ENST00000595384 785 ntTSL 511.79□□□□□ -0.523e-6■■■■■ 137.9
SF3B1O75533 CENPT-224ENST00000567482 586 ntTSL 411.79□□□□□ -0.523e-6■■■■■ 137.9
SF3B1O75533 RHOH-207ENST00000507851 814 ntTSL 311.78□□□□□ -0.523e-6■■■■■ 137.9
SF3B1O75533 JMJD7-PLA2G4B-204ENST00000487292 3178 ntTSL 211.77□□□□□ -0.525e-6■■■■■ 137.9
SF3B1O75533 LMBR1L-229ENST00000553040 768 ntTSL 511.77□□□□□ -0.533e-6■■■■■ 137.9
SF3B1O75533 L3MBTL2-206ENST00000466589 3055 ntTSL 1 (best)11.76□□□□□ -0.533e-6■■■■■ 137.9
SF3B1O75533 DCLRE1C-213ENST00000456122 877 ntTSL 511.75□□□□□ -0.533e-6■■■■■ 137.9
SF3B1O75533 AC002310.1-202ENST00000569752 752 ntTSL 311.75□□□□□ -0.533e-6■■■■■ 137.9
SF3B1O75533 FAM92A-204ENST00000517718 827 ntTSL 3 BASIC11.75□□□□□ -0.533e-6■■■■■ 137.9
SF3B1O75533 STRIP1-201ENST00000369795 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.533e-6■■■■■ 137.9
SF3B1O75533 DHRS4-AS1-205ENST00000556379 2852 ntTSL 1 (best) BASIC11.74□□□□□ -0.533e-6■■■■■ 137.9
SF3B1O75533 TRUB1-201ENST00000298746 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.533e-6■■■■■ 137.9
SF3B1O75533 GPAT4-210ENST00000521806 873 ntTSL 511.71□□□□□ -0.533e-6■■■■■ 137.9
SF3B1O75533 EFNB2-201ENST00000245323 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.533e-6■■■■■ 137.9
SF3B1O75533 METTL16-201ENST00000263092 5711 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.533e-6■■■■■ 137.9
SF3B1O75533 FBXO15-205ENST00000579517 1129 ntTSL 311.7□□□□□ -0.543e-6■■■■■ 137.9
SF3B1O75533 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.542e-6■■■■■ 137.9
SF3B1O75533 AC073529.1-201ENST00000608176 1549 ntTSL 5 BASIC11.7□□□□□ -0.548e-8■■■■■ 137.9
SF3B1O75533 CCNI-202ENST00000504697 610 ntTSL 411.68□□□□□ -0.543e-6■■■■■ 137.9
SF3B1O75533 NUMB-212ENST00000554546 3607 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.542e-6■■■■■ 137.9
SF3B1O75533 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.542e-6■■■■■ 137.9
SF3B1O75533 EXOC4-202ENST00000393161 1604 ntTSL 5 BASIC11.66□□□□□ -0.543e-6■■■■■ 137.9
SF3B1O75533 CADM2-201ENST00000383699 9488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.553e-6■■■■■ 137.9
SF3B1O75533 PIK3R4-201ENST00000356763 5015 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.553e-6■■■■■ 137.9
SF3B1O75533 SPTLC2-205ENST00000556607 460 ntTSL 311.64□□□□□ -0.553e-6■■■■■ 137.9
SF3B1O75533 RBM22-207ENST00000521594 566 ntTSL 411.64□□□□□ -0.553e-6■■■■■ 137.9
SF3B1O75533 OSBP2-204ENST00000407373 3669 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.553e-6■■■■■ 137.9
SF3B1O75533 STRIP1-205ENST00000485775 3363 ntTSL 1 (best)11.63□□□□□ -0.553e-6■■■■■ 137.9
SF3B1O75533 DCTD-217ENST00000514754 645 ntTSL 311.62□□□□□ -0.553e-6■■■■■ 137.9
SF3B1O75533 SPIDR-205ENST00000518060 482 ntAPPRIS ALT2 TSL 3 BASIC11.62□□□□□ -0.553e-6■■■■■ 137.9
SF3B1O75533 ZNF142-203ENST00000433921 5800 ntTSL 211.62□□□□□ -0.553e-6■■■■■ 137.9
SF3B1O75533 DIXDC1-207ENST00000614104 559 ntTSL 411.61□□□□□ -0.553e-6■■■■■ 137.9
SF3B1O75533 BCOR-204ENST00000378463 2230 ntTSL 5 BASIC11.61□□□□□ -0.556e-8■■■■■ 137.9
SF3B1O75533 SPTBN2-211ENST00000617502 3498 ntTSL 5 BASIC11.61□□□□□ -0.553e-6■■■■■ 137.9
SF3B1O75533 PFDN1-204ENST00000512707 798 ntTSL 211.6□□□□□ -0.553e-6■■■■■ 137.9
SF3B1O75533 TRIM5-209ENST00000483835 918 ntTSL 511.6□□□□□ -0.555e-6■■■■■ 137.9
SF3B1O75533 PCSK7-214ENST00000534529 5393 ntTSL 511.59□□□□□ -0.553e-6■■■■■ 137.9
SF3B1O75533 ABCB8-216ENST00000488551 552 ntTSL 411.58□□□□□ -0.563e-6■■■■■ 137.9
SF3B1O75533 EXTL3-208ENST00000520940 542 ntTSL 411.58□□□□□ -0.563e-6■■■■■ 137.9
SF3B1O75533 EMP3-202ENST00000593437 502 ntTSL 511.58□□□□□ -0.563e-6■■■■■ 137.9
SF3B1O75533 REC8-212ENST00000619469 2720 ntTSL 211.58□□□□□ -0.563e-6■■■■■ 137.9
SF3B1O75533 BTBD9-202ENST00000328403 1968 ntTSL 211.57□□□□□ -0.563e-6■■■■■ 137.9
SF3B1O75533 SIL1-210ENST00000508639 675 ntTSL 311.57□□□□□ -0.563e-6■■■■■ 137.9
SF3B1O75533 CD99L2-201ENST00000346693 4935 ntTSL 1 (best)11.57□□□□□ -0.563e-6■■■■■ 137.9
SF3B1O75533 ACSL1-203ENST00000503407 2409 ntTSL 211.56□□□□□ -0.563e-6■■■■■ 137.9
SF3B1O75533 AL080251.1-201ENST00000494072 4369 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.563e-6■■■■■ 137.9
SF3B1O75533 MPP7-202ENST00000375719 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.563e-6■■■■■ 137.9
SF3B1O75533 PFDN1-205ENST00000512925 900 ntTSL 211.55□□□□□ -0.563e-6■■■■■ 137.9
SF3B1O75533 PPIA-209ENST00000494484 2149 ntTSL 211.54□□□□□ -0.563e-6■■■■■ 137.9
SF3B1O75533 HAVCR2-206ENST00000524219 566 ntTSL 411.54□□□□□ -0.563e-6■■■■■ 137.9
SF3B1O75533 GGCX-203ENST00000423570 1339 ntTSL 1 (best)11.54□□□□□ -0.563e-6■■■■■ 137.9
SF3B1O75533 ZFP36L1-202ENST00000439696 3190 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.563e-6■■■■■ 137.9
SF3B1O75533 ZNF142-201ENST00000411696 5926 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.563e-6■■■■■ 137.9
SF3B1O75533 MFSD9-201ENST00000258436 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.563e-6■■■■■ 137.9
SF3B1O75533 ELMO2-209ENST00000462491 938 ntTSL 211.52□□□□□ -0.573e-6■■■■■ 137.9
SF3B1O75533 LANCL1-207ENST00000450366 4602 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.573e-6■■■■■ 137.9
SF3B1O75533 VARS2-213ENST00000625423 3362 ntTSL 2 BASIC11.51□□□□□ -0.575e-6■■■■■ 137.9
SF3B1O75533 LAMB1-203ENST00000393560 2806 ntTSL 1 (best) BASIC11.5□□□□□ -0.573e-6■■■■■ 137.9
SF3B1O75533 TRIAP1-201ENST00000302432 1153 ntTSL 211.5□□□□□ -0.573e-6■■■■■ 137.9
SF3B1O75533 RASGRP4-205ENST00000586305 3061 ntTSL 1 (best) BASIC11.47□□□□□ -0.573e-6■■■■■ 137.9
SF3B1O75533 TRIM3-211ENST00000532542 4419 ntTSL 211.46□□□□□ -0.583e-6■■■■■ 137.9
SF3B1O75533 SUGCT-207ENST00000464028 509 ntTSL 511.43□□□□□ -0.583e-6■■■■■ 137.9
SF3B1O75533 ILVBL-206ENST00000533086 4248 ntTSL 211.42□□□□□ -0.583e-6■■■■■ 137.9
SF3B1O75533 TYW1-206ENST00000495971 1302 ntTSL 211.42□□□□□ -0.588e-7■■■■■ 137.9
SF3B1O75533 PRDM7-203ENST00000564210 714 ntTSL 511.41□□□□□ -0.583e-6■■■■■ 137.9
SF3B1O75533 CD55-211ENST00000635614 1145 ntTSL 511.41□□□□□ -0.583e-6■■■■■ 137.9
SF3B1O75533 KIAA1841-204ENST00000453186 4472 ntTSL 1 (best)11.38□□□□□ -0.593e-6■■■■■ 137.9
SF3B1O75533 ASAP3-207ENST00000484418 907 ntTSL 311.36□□□□□ -0.593e-6■■■■■ 137.9
SF3B1O75533 SEMA4B-204ENST00000558065 3751 ntTSL 1 (best)11.36□□□□□ -0.593e-6■■■■■ 137.9
SF3B1O75533 GPAT4-208ENST00000521184 572 ntTSL 411.35□□□□□ -0.593e-6■■■■■ 137.9
SF3B1O75533 SOX6-213ENST00000530378 1818 ntTSL 211.35□□□□□ -0.593e-6■■■■■ 137.9
SF3B1O75533 POLR1D-206ENST00000489647 1723 ntTSL 1 (best) BASIC11.35□□□□□ -0.592e-11■■■■■ 137.9
SF3B1O75533 RPTOR-205ENST00000573163 501 ntTSL 311.35□□□□□ -0.593e-6■■■■■ 137.9
SF3B1O75533 SFXN5-208ENST00000463277 575 ntTSL 411.34□□□□□ -0.593e-6■■■■■ 137.9
SF3B1O75533 GGCX-208ENST00000481541 600 ntTSL 211.33□□□□□ -0.63e-6■■■■■ 137.9
SF3B1O75533 CCDC97-202ENST00000596882 413 ntTSL 311.33□□□□□ -0.63e-6■■■■■ 137.9
SF3B1O75533 IL4R-202ENST00000395762 3685 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.63e-6■■■■■ 137.9
SF3B1O75533 CENPT-229ENST00000568652 568 ntTSL 411.3□□□□□ -0.63e-6■■■■■ 137.9
SF3B1O75533 RASGRP4-202ENST00000426920 2650 ntTSL 1 (best) BASIC11.29□□□□□ -0.63e-6■■■■■ 137.9
SF3B1O75533 ARMCX5-204ENST00000477663 859 ntTSL 211.29□□□□□ -0.63e-6■■■■■ 137.9
SF3B1O75533 IL4R-201ENST00000170630 3380 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.63e-6■■■■■ 137.9
SF3B1O75533 ZNF8-201ENST00000621650 9128 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.63e-6■■■■■ 137.9
SF3B1O75533 ASAP3-209ENST00000495646 2552 ntTSL 2 BASIC11.28□□□□□ -0.63e-6■■■■■ 137.9
SF3B1O75533 FCF1-202ENST00000534938 794 ntTSL 3 BASIC11.28□□□□□ -0.63e-6■■■■■ 137.9
SF3B1O75533 AGBL2-203ENST00000525123 3577 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.63e-6■■■■■ 137.9
SF3B1O75533 RASGRP4-220ENST00000622174 2651 ntTSL 5 BASIC11.27□□□□□ -0.63e-6■■■■■ 137.9
SF3B1O75533 JAK1-201ENST00000342505 5047 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.614e-6■■■■■ 137.9
SF3B1O75533 AC010636.2-201ENST00000595094 522 ntTSL 5 BASIC11.27□□□□□ -0.613e-6■■■■■ 137.9
SF3B1O75533 YTHDC2-201ENST00000161863 6316 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.613e-6■■■■■ 137.9
SF3B1O75533 IMPDH2-211ENST00000491610 844 ntTSL 511.25□□□□□ -0.613e-6■■■■■ 137.9
SF3B1O75533 CIB2-205ENST00000557917 535 ntTSL 511.22□□□□□ -0.613e-6■■■■■ 137.9
SF3B1O75533 TRAPPC4-201ENST00000359005 849 ntTSL 2 BASIC11.22□□□□□ -0.613e-6■■■■■ 137.9
SF3B1O75533 ZNF814-208ENST00000596604 528 ntTSL 1 (best) BASIC11.22□□□□□ -0.613e-6■■■■■ 137.9
SF3B1O75533 EMP3-206ENST00000597279 683 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.613e-6■■■■■ 137.9
SF3B1O75533 E2F4-203ENST00000563238 736 ntTSL 211.21□□□□□ -0.613e-6■■■■■ 137.9
SF3B1O75533 CAMTA2-203ENST00000381311 4374 ntTSL 1 (best) BASIC11.21□□□□□ -0.623e-6■■■■■ 137.9
SF3B1O75533 URB2-201ENST00000258243 5613 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.623e-6■■■■■ 137.9
Retrieved 100 of 46,956 protein–RNA pairs in 1411.5 ms