RNA–Protein interactions for RNA: ENST00000481541.1

GGCX-208, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 2

Gene GGCX, Length 600 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-208ENST00000481541 AEBP2Q6ZN18 517 aaPredicted RBP31.77■■■□□ 2.68
GGCX-208ENST00000481541 CHIC1Q5VXU3 224 aa30.49■■■□□ 2.47
GGCX-208ENST00000481541 SENP3Q9H4L4 574 aaPredicted RBP27.11■■□□□ 1.93
GGCX-208ENST00000481541 PHF23Q9BUL5 403 aaPredicted RBP26.77■■□□□ 1.88
GGCX-208ENST00000481541 FOXD1Q16676 465 aa25.19■■□□□ 1.62
GGCX-208ENST00000481541 NISCHQ9Y2I1 1504 aa24.79■■□□□ 1.56
GGCX-208ENST00000481541 PLPPR3Q6T4P5 718 aa24.52■■□□□ 1.52
GGCX-208ENST00000481541 PPP6R1Q9UPN7 881 aa23.75■■□□□ 1.39
GGCX-208ENST00000481541 ADRA2BP18089 450 aa23.72■■□□□ 1.39
GGCX-208ENST00000481541 PIAS4Q8N2W9 510 aaPredicted RBP23.64■■□□□ 1.37
GGCX-208ENST00000481541 MSH5O43196 834 aa23.51■■□□□ 1.35
GGCX-208ENST00000481541 POTEDQ86YR6 584 aa22.41■■□□□ 1.18
GGCX-208ENST00000481541 CCDC180Q9P1Z9 1646 aa21.8■■□□□ 1.08
GGCX-208ENST00000481541 SCAF1Q9H7N4 1312 aaKnown RBP21.78■■□□□ 1.08
GGCX-208ENST00000481541 MAPK8IP2Q13387 824 aaPredicted RBP21.69■■□□□ 1.06
GGCX-208ENST00000481541 DMRT2Q9Y5R5 561 aa21.53■■□□□ 1.04
GGCX-208ENST00000481541 PPP4R3CPQ6ZMV5 832 aa21.51■■□□□ 1.03
GGCX-208ENST00000481541 CNKSR2Q8WXI2 1034 aa21.06■□□□□ 0.96
GGCX-208ENST00000481541 HOXD11P31277 338 aaPredicted RBP20.85■□□□□ 0.93
GGCX-208ENST00000481541 NCBP3Q53F19 620 aaKnown RBP20.82■□□□□ 0.92
GGCX-208ENST00000481541 ZCCHC6Q5VYS8 1495 aaKnown RBP20.78■□□□□ 0.92
GGCX-208ENST00000481541 RNF216Q9NWF9 866 aaPredicted RBP20.78■□□□□ 0.92
GGCX-208ENST00000481541 ABCC9O60706 1549 aa20.78■□□□□ 0.92
GGCX-208ENST00000481541 DCAF8L1A6NGE4 600 aa20.66■□□□□ 0.9
GGCX-208ENST00000481541 DCAF1Q9Y4B6 1507 aa20.56■□□□□ 0.88
GGCX-208ENST00000481541 NPM3O75607 178 aaKnown RBP20.47■□□□□ 0.87
GGCX-208ENST00000481541 DCAF8L2P0C7V8 631 aa20.45■□□□□ 0.86
GGCX-208ENST00000481541 MYO15BQ96JP2 1530 aa20.44■□□□□ 0.86
GGCX-208ENST00000481541 NACADO15069 1562 aa20.36■□□□□ 0.85
GGCX-208ENST00000481541 KCNA4P22459 653 aa20.33■□□□□ 0.85
GGCX-208ENST00000481541 RB1CC1Q8TDY2 1594 aa20.25■□□□□ 0.83
GGCX-208ENST00000481541 DNAJC5BQ9UF47 199 aa20.09■□□□□ 0.81
GGCX-208ENST00000481541 RNF39Q9H2S5 420 aa20.06■□□□□ 0.8
GGCX-208ENST00000481541 CACNB1Q02641 598 aaPredicted RBP19.99■□□□□ 0.79
GGCX-208ENST00000481541 SCRIBQ14160 1630 aa19.92■□□□□ 0.78
GGCX-208ENST00000481541 SHROOM4Q9ULL8 1493 aa19.91■□□□□ 0.78
GGCX-208ENST00000481541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.9■□□□□ 0.78
GGCX-208ENST00000481541 C1QBPQ07021 282 aaKnown RBP19.81■□□□□ 0.76
GGCX-208ENST00000481541 UNC13AQ9UPW8 1703 aa19.76■□□□□ 0.75
GGCX-208ENST00000481541 BICRAQ9NZM4 1560 aa19.6■□□□□ 0.73
GGCX-208ENST00000481541 PABPN1Q86U42 306 aaKnown RBP eCLIP19.49■□□□□ 0.71
GGCX-208ENST00000481541 U3KPZ7 1027 aaPredicted RBP19.48■□□□□ 0.71
GGCX-208ENST00000481541 SLC4A2P04920 1241 aa19.46■□□□□ 0.71
GGCX-208ENST00000481541 SLC4A1APQ9BWU0 796 aaKnown RBP19.28■□□□□ 0.68
GGCX-208ENST00000481541 CECR2Q9BXF3 1484 aa19.23■□□□□ 0.67
GGCX-208ENST00000481541 BAZ1AQ9NRL2 1556 aaPredicted RBP19.19■□□□□ 0.66
GGCX-208ENST00000481541 SMARCA4P51532 1647 aa19.11■□□□□ 0.65
GGCX-208ENST00000481541 MROH2BQ7Z745 1585 aa19.1■□□□□ 0.65
GGCX-208ENST00000481541 SPINK5Q9NQ38 1064 aaPredicted RBP19.1■□□□□ 0.65
GGCX-208ENST00000481541 RSF1Q96T23 1441 aaPredicted RBP19.09■□□□□ 0.65
GGCX-208ENST00000481541 CAPN15O75808 1086 aa19.09■□□□□ 0.65
GGCX-208ENST00000481541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.08■□□□□ 0.64
GGCX-208ENST00000481541 HNRNPUL2Q1KMD3 747 aaKnown RBP19.08■□□□□ 0.64
GGCX-208ENST00000481541 EIF4G1Q04637 1599 aaKnown RBP19.05■□□□□ 0.64
GGCX-208ENST00000481541 APLP2Q06481 763 aa19.04■□□□□ 0.64
GGCX-208ENST00000481541 SUPT5HO00267 1087 aaKnown RBP19.01■□□□□ 0.63
GGCX-208ENST00000481541 SAMD1Q6SPF0 538 aaPredicted RBP18.98■□□□□ 0.63
GGCX-208ENST00000481541 MYCNP04198 464 aaPredicted RBP18.95■□□□□ 0.62
GGCX-208ENST00000481541 PEG3Q9GZU2 1588 aa18.93■□□□□ 0.62
GGCX-208ENST00000481541 WIZO95785 1651 aa18.92■□□□□ 0.62
GGCX-208ENST00000481541 FOXD4L1Q9NU39 408 aa18.91■□□□□ 0.62
GGCX-208ENST00000481541 SMARCA2P51531 1590 aa18.89■□□□□ 0.61
GGCX-208ENST00000481541 DSG3P32926 999 aa18.88■□□□□ 0.61
GGCX-208ENST00000481541 ATAD2BQ9ULI0 1458 aa18.87■□□□□ 0.61
GGCX-208ENST00000481541 TRHP20396 242 aaPredicted RBP18.85■□□□□ 0.61
GGCX-208ENST00000481541 ZNF219Q9P2Y4 722 aaPredicted RBP18.85■□□□□ 0.61
GGCX-208ENST00000481541 CC2D2AQ9P2K1 1620 aa18.82■□□□□ 0.6
GGCX-208ENST00000481541 NCAPD3P42695 1498 aa18.78■□□□□ 0.6
GGCX-208ENST00000481541 TOP2AP11388 1531 aaKnown RBP18.78■□□□□ 0.6
GGCX-208ENST00000481541 BAZ1BQ9UIG0 1483 aaKnown RBP18.76■□□□□ 0.59
GGCX-208ENST00000481541 HMGXB3Q12766 1538 aa18.74■□□□□ 0.59
GGCX-208ENST00000481541 ZBTB22O15209 634 aa18.67■□□□□ 0.58
GGCX-208ENST00000481541 ABCB7O75027 752 aa18.66■□□□□ 0.58
GGCX-208ENST00000481541 CCDC88BA6NC98 1476 aa18.54■□□□□ 0.56
GGCX-208ENST00000481541 ATF5Q9Y2D1 282 aaPredicted RBP18.44■□□□□ 0.54
GGCX-208ENST00000481541 POLA2Q14181 598 aa18.4■□□□□ 0.54
GGCX-208ENST00000481541 ATXN8OSP0DMR3 200 aa18.32■□□□□ 0.52
GGCX-208ENST00000481541 CFTRP13569 1480 aa18.27■□□□□ 0.52
GGCX-208ENST00000481541 CADPSQ9ULU8 1353 aa18.26■□□□□ 0.51
GGCX-208ENST00000481541 LAMC3Q9Y6N6 1575 aa18.2■□□□□ 0.5
GGCX-208ENST00000481541 PRDM2Q13029 1718 aa18.17■□□□□ 0.5
GGCX-208ENST00000481541 NESP48681 1621 aa18.13■□□□□ 0.49
GGCX-208ENST00000481541 CSRNP3Q8WYN3 585 aa18.09■□□□□ 0.49
GGCX-208ENST00000481541 ZBTB12Q9Y330 459 aaPredicted RBP18.09■□□□□ 0.49
GGCX-208ENST00000481541 RBM42Q9BTD8 480 aaKnown RBP18.06■□□□□ 0.48
GGCX-208ENST00000481541 PDS5BQ9NTI5 1447 aa18.06■□□□□ 0.48
GGCX-208ENST00000481541 FANCD2Q9BXW9 1451 aa18.05■□□□□ 0.48
GGCX-208ENST00000481541 EHMT2Q96KQ7 1210 aa18.04■□□□□ 0.48
GGCX-208ENST00000481541 ABCC8Q09428 1581 aa18.03■□□□□ 0.48
GGCX-208ENST00000481541 WRNQ14191 1432 aaPredicted RBP eCLIP17.99■□□□□ 0.47
GGCX-208ENST00000481541 CEP164Q9UPV0 1460 aa17.98■□□□□ 0.47
GGCX-208ENST00000481541 TRIM41Q8WV44 630 aa17.95■□□□□ 0.46
GGCX-208ENST00000481541 KIF21AQ7Z4S6 1674 aa17.93■□□□□ 0.46
GGCX-208ENST00000481541 SYNJ1O43426 1573 aa17.91■□□□□ 0.46
GGCX-208ENST00000481541 TOP2BQ02880 1626 aa17.9■□□□□ 0.46
GGCX-208ENST00000481541 CUX1P39880 1505 aa17.89■□□□□ 0.45
GGCX-208ENST00000481541 BIVM-ERCC5R4GMW8 1640 aa17.89■□□□□ 0.45
GGCX-208ENST00000481541 ERCC6Q03468 1493 aa17.87■□□□□ 0.45
GGCX-208ENST00000481541 DNMBPQ6XZF7 1577 aa17.86■□□□□ 0.45
GGCX-208ENST00000481541 MRC2Q9UBG0 1479 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms