RNA–Protein interactions for RNA: ENST00000563238.5

E2F4-203, Transcript of E2F transcription factor 4, humanhuman

TSL 2

Gene E2F4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F4-203ENST00000563238 NISCHQ9Y2I1 1504 aa26.9■■□□□ 1.9
E2F4-203ENST00000563238 ABCC9O60706 1549 aa26.58■■□□□ 1.85
E2F4-203ENST00000563238 DNAJC5BQ9UF47 199 aa26.56■■□□□ 1.84
E2F4-203ENST00000563238 DNAJC5Q9H3Z4 198 aa25.75■■□□□ 1.71
E2F4-203ENST00000563238 CCDC180Q9P1Z9 1646 aa25.02■■□□□ 1.6
E2F4-203ENST00000563238 RB1CC1Q8TDY2 1594 aa24.61■■□□□ 1.53
E2F4-203ENST00000563238 PABPN1Q86U42 306 aaKnown RBP eCLIP24.38■■□□□ 1.49
E2F4-203ENST00000563238 CECR2Q9BXF3 1484 aa24.18■■□□□ 1.46
E2F4-203ENST00000563238 UNC13AQ9UPW8 1703 aa24.13■■□□□ 1.45
E2F4-203ENST00000563238 NACADO15069 1562 aa24.03■■□□□ 1.44
E2F4-203ENST00000563238 BICRAQ9NZM4 1560 aa24.01■■□□□ 1.43
E2F4-203ENST00000563238 CC2D2AQ9P2K1 1620 aa24.01■■□□□ 1.43
E2F4-203ENST00000563238 CUX2O14529 1486 aa23.77■■□□□ 1.4
E2F4-203ENST00000563238 TRIM41Q8WV44 630 aa23.69■■□□□ 1.38
E2F4-203ENST00000563238 SHROOM4Q9ULL8 1493 aa23.56■■□□□ 1.36
E2F4-203ENST00000563238 EIF4G1Q04637 1599 aaKnown RBP23.52■■□□□ 1.36
E2F4-203ENST00000563238 MYO15BQ96JP2 1530 aa23.19■■□□□ 1.3
E2F4-203ENST00000563238 DCAF8L2P0C7V8 631 aa23.18■■□□□ 1.3
E2F4-203ENST00000563238 ERCC6Q03468 1493 aa23.05■■□□□ 1.28
E2F4-203ENST00000563238 AEBP2Q6ZN18 517 aaPredicted RBP22.78■■□□□ 1.24
E2F4-203ENST00000563238 THOC2Q8NI27 1593 aaKnown RBP22.6■■□□□ 1.21
E2F4-203ENST00000563238 SCRIBQ14160 1630 aa22.58■■□□□ 1.21
E2F4-203ENST00000563238 NESP48681 1621 aa22.35■■□□□ 1.17
E2F4-203ENST00000563238 BAZ1AQ9NRL2 1556 aaPredicted RBP22.31■■□□□ 1.16
E2F4-203ENST00000563238 ILDR1Q86SU0 546 aaPredicted RBP22.28■■□□□ 1.16
E2F4-203ENST00000563238 OSCARQ8IYS5 282 aa22.26■■□□□ 1.15
E2F4-203ENST00000563238 RIMBP3CA6NJZ7 1639 aa22.26■■□□□ 1.15
E2F4-203ENST00000563238 RIMBP3BA6NNM3 1639 aa22.26■■□□□ 1.15
E2F4-203ENST00000563238 RIMBP3Q9UFD9 1639 aa22.26■■□□□ 1.15
E2F4-203ENST00000563238 NCAPD3P42695 1498 aa22.21■■□□□ 1.15
E2F4-203ENST00000563238 DCAF1Q9Y4B6 1507 aa22.21■■□□□ 1.15
E2F4-203ENST00000563238 SMARCA2P51531 1590 aa22.14■■□□□ 1.13
E2F4-203ENST00000563238 TRHP20396 242 aaPredicted RBP22.09■■□□□ 1.13
E2F4-203ENST00000563238 KIF21AQ7Z4S6 1674 aa22.07■■□□□ 1.12
E2F4-203ENST00000563238 ARHGEF11O15085 1522 aa22■■□□□ 1.11
E2F4-203ENST00000563238 LAMC3Q9Y6N6 1575 aa21.99■■□□□ 1.11
E2F4-203ENST00000563238 ZCCHC6Q5VYS8 1495 aaKnown RBP21.93■■□□□ 1.1
E2F4-203ENST00000563238 HMGXB3Q12766 1538 aa21.9■■□□□ 1.1
E2F4-203ENST00000563238 WDR62O43379 1518 aa21.86■■□□□ 1.09
E2F4-203ENST00000563238 PDS5BQ9NTI5 1447 aa21.86■■□□□ 1.09
E2F4-203ENST00000563238 ATAD2BQ9ULI0 1458 aa21.84■■□□□ 1.09
E2F4-203ENST00000563238 CYB5RLQ6IPT4 315 aa21.8■■□□□ 1.08
E2F4-203ENST00000563238 MRC2Q9UBG0 1479 aa21.79■■□□□ 1.08
E2F4-203ENST00000563238 ARAP1Q96P48 1450 aa21.65■■□□□ 1.06
E2F4-203ENST00000563238 BAZ1BQ9UIG0 1483 aaKnown RBP21.49■■□□□ 1.03
E2F4-203ENST00000563238 SMARCA4P51532 1647 aa21.39■■□□□ 1.01
E2F4-203ENST00000563238 CADPSQ9ULU8 1353 aa21.38■■□□□ 1.01
E2F4-203ENST00000563238 RSF1Q96T23 1441 aaPredicted RBP21.33■■□□□ 1.01
E2F4-203ENST00000563238 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
E2F4-203ENST00000563238 PEG3Q9GZU2 1588 aa21.28■■□□□ 1
E2F4-203ENST00000563238 FANCD2Q9BXW9 1451 aa21.13■□□□□ 0.97
E2F4-203ENST00000563238 CHD1O14646 1710 aa21.13■□□□□ 0.97
E2F4-203ENST00000563238 KDM4FA0A1W2PPD8 638 aa21.13■□□□□ 0.97
E2F4-203ENST00000563238 URB2Q14146 1524 aaKnown RBP21.1■□□□□ 0.97
E2F4-203ENST00000563238 ZNF608Q9ULD9 1512 aaPredicted RBP21.1■□□□□ 0.97
E2F4-203ENST00000563238 ERCC6L2Q5T890 1561 aa21.09■□□□□ 0.97
E2F4-203ENST00000563238 FBXO41Q8TF61 875 aa21.05■□□□□ 0.96
E2F4-203ENST00000563238 LMTK3Q96Q04 1460 aa21.05■□□□□ 0.96
E2F4-203ENST00000563238 SOCS7O14512 581 aa20.99■□□□□ 0.95
E2F4-203ENST00000563238 IFT140Q96RY7 1462 aa20.99■□□□□ 0.95
E2F4-203ENST00000563238 EIF4G3O43432 1585 aaKnown RBP20.94■□□□□ 0.94
E2F4-203ENST00000563238 CLASP1Q7Z460 1538 aa20.88■□□□□ 0.93
E2F4-203ENST00000563238 HECW2Q9P2P5 1572 aa20.88■□□□□ 0.93
E2F4-203ENST00000563238 KIF13AQ9H1H9 1805 aa20.83■□□□□ 0.93
E2F4-203ENST00000563238 CFTRP13569 1480 aa20.81■□□□□ 0.92
E2F4-203ENST00000563238 ILDR2Q71H61 639 aa20.76■□□□□ 0.91
E2F4-203ENST00000563238 FBLN2P98095 1184 aa20.73■□□□□ 0.91
E2F4-203ENST00000563238 GAPVD1Q14C86 1478 aa20.73■□□□□ 0.91
E2F4-203ENST00000563238 MROH2BQ7Z745 1585 aa20.68■□□□□ 0.9
E2F4-203ENST00000563238 SYNJ1O43426 1573 aa20.65■□□□□ 0.9
E2F4-203ENST00000563238 AQRO60306 1485 aaKnown RBP eCLIP20.65■□□□□ 0.95e-7■■■■□ 23.9
E2F4-203ENST00000563238 KDM6BO15054 1643 aa20.58■□□□□ 0.89
E2F4-203ENST00000563238 SYNJ2O15056 1496 aa20.57■□□□□ 0.88
E2F4-203ENST00000563238 TARBP1Q13395 1621 aaKnown RBP20.57■□□□□ 0.88
E2F4-203ENST00000563238 TOPBP1Q92547 1522 aa20.55■□□□□ 0.88
E2F4-203ENST00000563238 ADGRL1O94910 1474 aa20.55■□□□□ 0.88
E2F4-203ENST00000563238 PRDM2Q13029 1718 aa20.53■□□□□ 0.88
E2F4-203ENST00000563238 DISP3Q9P2K9 1392 aa20.49■□□□□ 0.87
E2F4-203ENST00000563238 SNAPC4Q5SXM2 1469 aa20.41■□□□□ 0.86
E2F4-203ENST00000563238 ABCC10Q5T3U5 1492 aa20.41■□□□□ 0.86
E2F4-203ENST00000563238 ABCC8Q09428 1581 aa20.41■□□□□ 0.86
E2F4-203ENST00000563238 CHMP7Q8WUX9 453 aaPredicted RBP20.36■□□□□ 0.85
E2F4-203ENST00000563238 WIZO95785 1651 aa20.35■□□□□ 0.85
E2F4-203ENST00000563238 FAM69CQ0P6D2 419 aa20.34■□□□□ 0.85
E2F4-203ENST00000563238 DNMBPQ6XZF7 1577 aa20.34■□□□□ 0.85
E2F4-203ENST00000563238 MAGI1Q96QZ7 1491 aaPredicted RBP20.33■□□□□ 0.85
E2F4-203ENST00000563238 DIP2BQ9P265 1576 aa20.33■□□□□ 0.84
E2F4-203ENST00000563238 WDR97A6NE52 1622 aa20.29■□□□□ 0.84
E2F4-203ENST00000563238 POLA1P09884 1462 aaPredicted RBP20.23■□□□□ 0.83
E2F4-203ENST00000563238 MAPKBP1O60336 1514 aa20.22■□□□□ 0.83
E2F4-203ENST00000563238 SPATA31D1Q6ZQQ2 1576 aa20.22■□□□□ 0.83
E2F4-203ENST00000563238 TDRD9Q8NDG6 1382 aaKnown RBP20.21■□□□□ 0.83
E2F4-203ENST00000563238 TSPOAP1O95153 1857 aa20.19■□□□□ 0.82
E2F4-203ENST00000563238 CEP170Q5SW79 1584 aa20.16■□□□□ 0.82
E2F4-203ENST00000563238 GRIN2BQ13224 1484 aa20.12■□□□□ 0.81
E2F4-203ENST00000563238 RAD54L2Q9Y4B4 1467 aa20.12■□□□□ 0.81
E2F4-203ENST00000563238 SHROOM2Q13796 1616 aa20.09■□□□□ 0.81
E2F4-203ENST00000563238 TOP2BQ02880 1626 aa20.06■□□□□ 0.8
E2F4-203ENST00000563238 SOGA1O94964 1423 aa20.04■□□□□ 0.8
E2F4-203ENST00000563238 TOP2AP11388 1531 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms