RNA–Protein interactions for RNA: ENST00000245323.4

EFNB2-201, Transcript of ephrin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB2, Length 4,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2-201ENST00000245323 DCAF8L2P0C7V8 631 aa21.11■□□□□ 0.97
EFNB2-201ENST00000245323 NISCHQ9Y2I1 1504 aa20.86■□□□□ 0.93
EFNB2-201ENST00000245323 SHROOM4Q9ULL8 1493 aa19.86■□□□□ 0.77
EFNB2-201ENST00000245323 SUPT5HO00267 1087 aaKnown RBP19.81■□□□□ 0.76
EFNB2-201ENST00000245323 EHMT2Q96KQ7 1210 aa19.19■□□□□ 0.66
EFNB2-201ENST00000245323 FAM9AQ8IZU1 332 aaPredicted RBP18.69■□□□□ 0.58
EFNB2-201ENST00000245323 TTBK1Q5TCY1 1321 aaPredicted RBP18.37■□□□□ 0.53
EFNB2-201ENST00000245323 RANGAP1P46060 587 aaPredicted RBP18.35■□□□□ 0.53
EFNB2-201ENST00000245323 ABCC9O60706 1549 aa18.28■□□□□ 0.52
EFNB2-201ENST00000245323 TRIM41Q8WV44 630 aa18.18■□□□□ 0.5
EFNB2-201ENST00000245323 PABPN1Q86U42 306 aaKnown RBP eCLIP18.14■□□□□ 0.5
EFNB2-201ENST00000245323 PCGF6Q9BYE7 350 aa18.04■□□□□ 0.48
EFNB2-201ENST00000245323 APLP2Q06481 763 aa17.96■□□□□ 0.47
EFNB2-201ENST00000245323 ATP1B4Q9UN42 357 aaPredicted RBP17.91■□□□□ 0.46
EFNB2-201ENST00000245323 PPARGC1BQ86YN6 1023 aaKnown RBP17.91■□□□□ 0.46
EFNB2-201ENST00000245323 UBTFP17480 764 aaKnown RBP17.9■□□□□ 0.46
EFNB2-201ENST00000245323 LOC105371045A0A1W2PR82 267 aa17.78■□□□□ 0.44
EFNB2-201ENST00000245323 CHIC1Q5VXU3 224 aa17.69■□□□□ 0.42
EFNB2-201ENST00000245323 CCER1Q8TC90 406 aaPredicted RBP17.4■□□□□ 0.38
EFNB2-201ENST00000245323 ITGAEP38570 1179 aa17.37■□□□□ 0.37
EFNB2-201ENST00000245323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.33■□□□□ 0.37
EFNB2-201ENST00000245323 HNRNPUL2Q1KMD3 747 aaKnown RBP17.33■□□□□ 0.37
EFNB2-201ENST00000245323 SCRIBQ14160 1630 aa17.29■□□□□ 0.36
EFNB2-201ENST00000245323 ZCCHC6Q5VYS8 1495 aaKnown RBP17.24■□□□□ 0.35
EFNB2-201ENST00000245323 FBLN2P98095 1184 aa17.13■□□□□ 0.33
EFNB2-201ENST00000245323 TRIM26Q12899 539 aaPredicted RBP17.11■□□□□ 0.33
EFNB2-201ENST00000245323 MYT1LQ9UL68 1186 aa17.07■□□□□ 0.32
EFNB2-201ENST00000245323 ZEB1P37275 1124 aaPredicted RBP17.03■□□□□ 0.32
EFNB2-201ENST00000245323 ARID3CA6NKF2 412 aa17.02■□□□□ 0.32
EFNB2-201ENST00000245323 P3H3Q8IVL6 736 aa17.02■□□□□ 0.32
EFNB2-201ENST00000245323 YTHDC1Q96MU7 727 aaKnown RBP17.01■□□□□ 0.31
EFNB2-201ENST00000245323 CCDC180Q9P1Z9 1646 aa16.99■□□□□ 0.31
EFNB2-201ENST00000245323 HRCP23327 699 aa16.99■□□□□ 0.31
EFNB2-201ENST00000245323 CNGB1Q14028 1251 aaPredicted RBP16.88■□□□□ 0.29
EFNB2-201ENST00000245323 FAM50AQ14320 339 aaKnown RBP16.86■□□□□ 0.29
EFNB2-201ENST00000245323 CSRNP3Q8WYN3 585 aa16.86■□□□□ 0.29
EFNB2-201ENST00000245323 POLR3GLQ9BT43 218 aa16.81■□□□□ 0.28
EFNB2-201ENST00000245323 CENPBP07199 599 aaPredicted RBP16.8■□□□□ 0.28
EFNB2-201ENST00000245323 PELP1Q8IZL8 1130 aaKnown RBP16.74■□□□□ 0.27
EFNB2-201ENST00000245323 RB1CC1Q8TDY2 1594 aa16.73■□□□□ 0.27
EFNB2-201ENST00000245323 RSF1Q96T23 1441 aaPredicted RBP16.72■□□□□ 0.27
EFNB2-201ENST00000245323 CECR2Q9BXF3 1484 aa16.68■□□□□ 0.26
EFNB2-201ENST00000245323 TRIM52Q96A61 297 aa16.63■□□□□ 0.25
EFNB2-201ENST00000245323 NEUROD1Q13562 356 aa16.63■□□□□ 0.25
EFNB2-201ENST00000245323 NACADO15069 1562 aa16.58■□□□□ 0.24
EFNB2-201ENST00000245323 ZNF777Q9ULD5 760 aaPredicted RBP16.56■□□□□ 0.24
EFNB2-201ENST00000245323 ZNF326Q5BKZ1 582 aaKnown RBP16.49■□□□□ 0.23
EFNB2-201ENST00000245323 MYO15BQ96JP2 1530 aa16.44■□□□□ 0.22
EFNB2-201ENST00000245323 DIEXFQ68CQ4 756 aaKnown RBP16.44■□□□□ 0.22
EFNB2-201ENST00000245323 BAZ1BQ9UIG0 1483 aaKnown RBP16.43■□□□□ 0.22
EFNB2-201ENST00000245323 SLC4A1APQ9BWU0 796 aaKnown RBP16.43■□□□□ 0.22
EFNB2-201ENST00000245323 CHMP7Q8WUX9 453 aaPredicted RBP16.4■□□□□ 0.22
EFNB2-201ENST00000245323 NEFLP07196 543 aa16.38■□□□□ 0.21
EFNB2-201ENST00000245323 CHIC2Q9UKJ5 165 aa16.35■□□□□ 0.21
EFNB2-201ENST00000245323 MROH2BQ7Z745 1585 aa16.34■□□□□ 0.21
EFNB2-201ENST00000245323 PLPPR3Q6T4P5 718 aa16.33■□□□□ 0.2
EFNB2-201ENST00000245323 DCAF1Q9Y4B6 1507 aa16.31■□□□□ 0.2
EFNB2-201ENST00000245323 WRNQ14191 1432 aaPredicted RBP eCLIP16.3■□□□□ 0.2
EFNB2-201ENST00000245323 BAZ1AQ9NRL2 1556 aaPredicted RBP16.25■□□□□ 0.19
EFNB2-201ENST00000245323 CDK11AQ9UQ88 783 aaPredicted RBP16.24■□□□□ 0.19
EFNB2-201ENST00000245323 KCNH8Q96L42 1107 aa16.23■□□□□ 0.19
EFNB2-201ENST00000245323 ERICH6Q7L0X2 663 aa16.22■□□□□ 0.19
EFNB2-201ENST00000245323 SENP3Q9H4L4 574 aaPredicted RBP16.19■□□□□ 0.18
EFNB2-201ENST00000245323 CLIP1P30622 1438 aa16.19■□□□□ 0.18
EFNB2-201ENST00000245323 NPM1P06748 294 aaKnown RBP eCLIP16.17■□□□□ 0.18
EFNB2-201ENST00000245323 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.17■□□□□ 0.18
EFNB2-201ENST00000245323 SOGA1O94964 1423 aa16.17■□□□□ 0.18
EFNB2-201ENST00000245323 CCDC88BA6NC98 1476 aa16.14■□□□□ 0.17
EFNB2-201ENST00000245323 ERCC6Q03468 1493 aa16.14■□□□□ 0.17
EFNB2-201ENST00000245323 CHGAP10645 457 aaKnown RBP16.13■□□□□ 0.17
EFNB2-201ENST00000245323 BCANQ96GW7 911 aa16.13■□□□□ 0.17
EFNB2-201ENST00000245323 MTUS2Q5JR59 1369 aa16.11■□□□□ 0.17
EFNB2-201ENST00000245323 ABCC8Q09428 1581 aa16.1■□□□□ 0.17
EFNB2-201ENST00000245323 RRP7BPQ9NSQ0 103 aa16.09■□□□□ 0.17
EFNB2-201ENST00000245323 CEP162Q5TB80 1403 aa16.09■□□□□ 0.17
EFNB2-201ENST00000245323 ZNF316A6NFI3 1004 aaPredicted RBP16.09■□□□□ 0.17
EFNB2-201ENST00000245323 WIZO95785 1651 aa16.07■□□□□ 0.16
EFNB2-201ENST00000245323 HIRIP3Q9BW71 556 aaPredicted RBP16.07■□□□□ 0.16
EFNB2-201ENST00000245323 GTF3C3Q9Y5Q9 886 aa16.06■□□□□ 0.16
EFNB2-201ENST00000245323 TDRD9Q8NDG6 1382 aaKnown RBP16.06■□□□□ 0.16
EFNB2-201ENST00000245323 KIF27Q86VH2 1401 aa16.06■□□□□ 0.16
EFNB2-201ENST00000245323 CUX2O14529 1486 aa16.02■□□□□ 0.15
EFNB2-201ENST00000245323 GOLGA3Q08378 1498 aa16■□□□□ 0.15
EFNB2-201ENST00000245323 KDM2AQ9Y2K7 1162 aa15.99■□□□□ 0.15
EFNB2-201ENST00000245323 TSPY4P0CV99 314 aa15.99■□□□□ 0.15
EFNB2-201ENST00000245323 TSPY10P0CW01 314 aa15.99■□□□□ 0.15
EFNB2-201ENST00000245323 PLEKHD1A6NEE1 506 aa15.97■□□□□ 0.15
EFNB2-201ENST00000245323 ESF1Q9H501 851 aaKnown RBP15.96■□□□□ 0.15
EFNB2-201ENST00000245323 CARMIL1Q5VZK9 1371 aa15.95■□□□□ 0.14
EFNB2-201ENST00000245323 STAG3Q9UJ98 1225 aa15.92■□□□□ 0.14
EFNB2-201ENST00000245323 ATAD2BQ9ULI0 1458 aa15.92■□□□□ 0.14
EFNB2-201ENST00000245323 ANP32CO43423 234 aa15.91■□□□□ 0.14
EFNB2-201ENST00000245323 DDX10Q13206 875 aaKnown RBP15.91■□□□□ 0.14
EFNB2-201ENST00000245323 EEA1Q15075 1411 aa15.91■□□□□ 0.14
EFNB2-201ENST00000245323 TNIKQ9UKE5 1360 aa15.91■□□□□ 0.14
EFNB2-201ENST00000245323 TONSLQ96HA7 1378 aa15.9■□□□□ 0.14
EFNB2-201ENST00000245323 CFDP1Q9UEE9 299 aaPredicted RBP15.88■□□□□ 0.13
EFNB2-201ENST00000245323 CEP164Q9UPV0 1460 aa15.88■□□□□ 0.13
EFNB2-201ENST00000245323 RGL3Q3MIN7 710 aa15.87■□□□□ 0.13
EFNB2-201ENST00000245323 SMARCA2P51531 1590 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms