RNA–Protein interactions for RNA: ENST00000423570.5

GGCX-203, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 1 (best)

Gene GGCX, Length 1,339 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-203ENST00000423570 AEBP2Q6ZN18 517 aaPredicted RBP29.06■■■□□ 2.24
GGCX-203ENST00000423570 CHIC1Q5VXU3 224 aa28.46■■■□□ 2.15
GGCX-203ENST00000423570 NISCHQ9Y2I1 1504 aa25.34■■□□□ 1.65
GGCX-203ENST00000423570 PHF23Q9BUL5 403 aaPredicted RBP25.06■■□□□ 1.6
GGCX-203ENST00000423570 SENP3Q9H4L4 574 aaPredicted RBP24.65■■□□□ 1.54
GGCX-203ENST00000423570 PLPPR3Q6T4P5 718 aa23.17■■□□□ 1.3
GGCX-203ENST00000423570 FOXD1Q16676 465 aa22.89■■□□□ 1.26
GGCX-203ENST00000423570 CCDC180Q9P1Z9 1646 aa22.47■■□□□ 1.19
GGCX-203ENST00000423570 ADRA2BP18089 450 aa22.12■■□□□ 1.13
GGCX-203ENST00000423570 PPP6R1Q9UPN7 881 aa22.1■■□□□ 1.13
GGCX-203ENST00000423570 ABCC9O60706 1549 aa22.03■■□□□ 1.12
GGCX-203ENST00000423570 PIAS4Q8N2W9 510 aaPredicted RBP21.62■■□□□ 1.05
GGCX-203ENST00000423570 ZCCHC6Q5VYS8 1495 aaKnown RBP21.14■□□□□ 0.98
GGCX-203ENST00000423570 NACADO15069 1562 aa21.13■□□□□ 0.97
GGCX-203ENST00000423570 DCAF8L2P0C7V8 631 aa21.12■□□□□ 0.97
GGCX-203ENST00000423570 RB1CC1Q8TDY2 1594 aa21.09■□□□□ 0.97
GGCX-203ENST00000423570 MYO15BQ96JP2 1530 aa21.09■□□□□ 0.97
GGCX-203ENST00000423570 MSH5O43196 834 aa21.06■□□□□ 0.96
GGCX-203ENST00000423570 DCAF1Q9Y4B6 1507 aa21.04■□□□□ 0.96
GGCX-203ENST00000423570 DNAJC5BQ9UF47 199 aa20.66■□□□□ 0.9
GGCX-203ENST00000423570 PABPN1Q86U42 306 aaKnown RBP eCLIP20.49■□□□□ 0.87
GGCX-203ENST00000423570 PPP4R3CPQ6ZMV5 832 aa20.46■□□□□ 0.87
GGCX-203ENST00000423570 SCRIBQ14160 1630 aa20.45■□□□□ 0.86
GGCX-203ENST00000423570 UNC13AQ9UPW8 1703 aa20.44■□□□□ 0.86
GGCX-203ENST00000423570 BICRAQ9NZM4 1560 aa20.33■□□□□ 0.85
GGCX-203ENST00000423570 SHROOM4Q9ULL8 1493 aa20.33■□□□□ 0.84
GGCX-203ENST00000423570 SCAF1Q9H7N4 1312 aaKnown RBP20.26■□□□□ 0.83
GGCX-203ENST00000423570 MAPK8IP2Q13387 824 aaPredicted RBP20.07■□□□□ 0.8
GGCX-203ENST00000423570 KCNA4P22459 653 aa20.05■□□□□ 0.8
GGCX-203ENST00000423570 NCBP3Q53F19 620 aaKnown RBP19.97■□□□□ 0.79
GGCX-203ENST00000423570 CC2D2AQ9P2K1 1620 aa19.89■□□□□ 0.78
GGCX-203ENST00000423570 CECR2Q9BXF3 1484 aa19.86■□□□□ 0.77
GGCX-203ENST00000423570 CNKSR2Q8WXI2 1034 aa19.85■□□□□ 0.77
GGCX-203ENST00000423570 EIF4G1Q04637 1599 aaKnown RBP19.85■□□□□ 0.77
GGCX-203ENST00000423570 DMRT2Q9Y5R5 561 aa19.68■□□□□ 0.74
GGCX-203ENST00000423570 BAZ1AQ9NRL2 1556 aaPredicted RBP19.67■□□□□ 0.74
GGCX-203ENST00000423570 NPM3O75607 178 aaKnown RBP19.62■□□□□ 0.73
GGCX-203ENST00000423570 SMARCA4P51532 1647 aa19.61■□□□□ 0.73
GGCX-203ENST00000423570 SMARCA2P51531 1590 aa19.52■□□□□ 0.72
GGCX-203ENST00000423570 MROH2BQ7Z745 1585 aa19.48■□□□□ 0.71
GGCX-203ENST00000423570 NCAPD3P42695 1498 aa19.47■□□□□ 0.71
GGCX-203ENST00000423570 ATAD2BQ9ULI0 1458 aa19.47■□□□□ 0.71
GGCX-203ENST00000423570 PEG3Q9GZU2 1588 aa19.44■□□□□ 0.7
GGCX-203ENST00000423570 RNF216Q9NWF9 866 aaPredicted RBP19.42■□□□□ 0.7
GGCX-203ENST00000423570 HMGXB3Q12766 1538 aa19.4■□□□□ 0.7
GGCX-203ENST00000423570 BAZ1BQ9UIG0 1483 aaKnown RBP19.36■□□□□ 0.69
GGCX-203ENST00000423570 RSF1Q96T23 1441 aaPredicted RBP19.36■□□□□ 0.69
GGCX-203ENST00000423570 HOXD11P31277 338 aaPredicted RBP19.29■□□□□ 0.68
GGCX-203ENST00000423570 WIZO95785 1651 aa19.25■□□□□ 0.67
GGCX-203ENST00000423570 TOP2AP11388 1531 aaKnown RBP19.14■□□□□ 0.65
GGCX-203ENST00000423570 SLC4A1APQ9BWU0 796 aaKnown RBP19.14■□□□□ 0.65
GGCX-203ENST00000423570 DNAJC5Q9H3Z4 198 aa19.06■□□□□ 0.64
GGCX-203ENST00000423570 ERCC6Q03468 1493 aa19.06■□□□□ 0.64
GGCX-203ENST00000423570 POTEDQ86YR6 584 aa19.05■□□□□ 0.64
GGCX-203ENST00000423570 CUX2O14529 1486 aa19.03■□□□□ 0.64
GGCX-203ENST00000423570 SUPT5HO00267 1087 aaKnown RBP19■□□□□ 0.63
GGCX-203ENST00000423570 DCAF8L1A6NGE4 600 aa18.97■□□□□ 0.63
GGCX-203ENST00000423570 LAMC3Q9Y6N6 1575 aa18.94■□□□□ 0.62
GGCX-203ENST00000423570 CADPSQ9ULU8 1353 aa18.93■□□□□ 0.62
GGCX-203ENST00000423570 CCDC88BA6NC98 1476 aa18.89■□□□□ 0.61
GGCX-203ENST00000423570 NESP48681 1621 aa18.88■□□□□ 0.61
GGCX-203ENST00000423570 PDS5BQ9NTI5 1447 aa18.85■□□□□ 0.61
GGCX-203ENST00000423570 CFTRP13569 1480 aa18.83■□□□□ 0.61
GGCX-203ENST00000423570 THOC2Q8NI27 1593 aaKnown RBP18.71■□□□□ 0.59
GGCX-203ENST00000423570 EHMT2Q96KQ7 1210 aa18.71■□□□□ 0.59
GGCX-203ENST00000423570 FANCD2Q9BXW9 1451 aa18.68■□□□□ 0.58
GGCX-203ENST00000423570 CEP164Q9UPV0 1460 aa18.67■□□□□ 0.58
GGCX-203ENST00000423570 PRDM2Q13029 1718 aa18.64■□□□□ 0.57
GGCX-203ENST00000423570 KIF21AQ7Z4S6 1674 aa18.64■□□□□ 0.57
GGCX-203ENST00000423570 MRC2Q9UBG0 1479 aa18.59■□□□□ 0.57
GGCX-203ENST00000423570 ABCC8Q09428 1581 aa18.51■□□□□ 0.55
GGCX-203ENST00000423570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.5■□□□□ 0.556e-6■■□□□ 13.6
GGCX-203ENST00000423570 WDR62O43379 1518 aa18.5■□□□□ 0.55
GGCX-203ENST00000423570 SLC4A2P04920 1241 aa18.49■□□□□ 0.55
GGCX-203ENST00000423570 URB2Q14146 1524 aaKnown RBP18.43■□□□□ 0.54
GGCX-203ENST00000423570 CSRNP3Q8WYN3 585 aa18.43■□□□□ 0.54
GGCX-203ENST00000423570 FOXD4L1Q9NU39 408 aa18.42■□□□□ 0.54
GGCX-203ENST00000423570 ZBTB22O15209 634 aa18.41■□□□□ 0.54
GGCX-203ENST00000423570 DNMBPQ6XZF7 1577 aa18.39■□□□□ 0.53
GGCX-203ENST00000423570 TOPBP1Q92547 1522 aa18.38■□□□□ 0.53
GGCX-203ENST00000423570 WRNQ14191 1432 aaPredicted RBP eCLIP18.3■□□□□ 0.52
GGCX-203ENST00000423570 CUX1P39880 1505 aa18.28■□□□□ 0.52
GGCX-203ENST00000423570 IFT140Q96RY7 1462 aa18.27■□□□□ 0.52
GGCX-203ENST00000423570 POLA1P09884 1462 aaPredicted RBP18.23■□□□□ 0.51
GGCX-203ENST00000423570 FGD5Q6ZNL6 1462 aa18.22■□□□□ 0.51
GGCX-203ENST00000423570 TRIM41Q8WV44 630 aa18.21■□□□□ 0.51
GGCX-203ENST00000423570 TOP2BQ02880 1626 aa18.2■□□□□ 0.5
GGCX-203ENST00000423570 SOGA1O94964 1423 aa18.2■□□□□ 0.5
GGCX-203ENST00000423570 BIVM-ERCC5R4GMW8 1640 aa18.18■□□□□ 0.5
GGCX-203ENST00000423570 OSCARQ8IYS5 282 aa18.17■□□□□ 0.5
GGCX-203ENST00000423570 SYNJ1O43426 1573 aa18.15■□□□□ 0.5
GGCX-203ENST00000423570 TARBP1Q13395 1621 aaKnown RBP18.14■□□□□ 0.49
GGCX-203ENST00000423570 WDR97A6NE52 1622 aa18.12■□□□□ 0.49
GGCX-203ENST00000423570 MYCNP04198 464 aaPredicted RBP18.12■□□□□ 0.49
GGCX-203ENST00000423570 U3KPZ7 1027 aaPredicted RBP18.12■□□□□ 0.49
GGCX-203ENST00000423570 RAD54L2Q9Y4B4 1467 aa18.12■□□□□ 0.49
GGCX-203ENST00000423570 ABCA10Q8WWZ4 1543 aa18.08■□□□□ 0.48
GGCX-203ENST00000423570 ZNF608Q9ULD9 1512 aaPredicted RBP18.08■□□□□ 0.48
GGCX-203ENST00000423570 TDRD9Q8NDG6 1382 aaKnown RBP18.04■□□□□ 0.48
GGCX-203ENST00000423570 EIF4G3O43432 1585 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 906.4 ms