Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
CLIC4Q9Y696 AL512353.2-201ENST00000448759 1962 ntBASIC21.83■■□□□ 1.08
CLIC4Q9Y696 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLIC4Q9Y696 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLIC4Q9Y696 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLIC4Q9Y696 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.82■■□□□ 1.08
CLIC4Q9Y696 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLIC4Q9Y696 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLIC4Q9Y696 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.82■■□□□ 1.08
CLIC4Q9Y696 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CLIC4Q9Y696 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLIC4Q9Y696 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CLIC4Q9Y696 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLIC4Q9Y696 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLIC4Q9Y696 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.82■■□□□ 1.08
CLIC4Q9Y696 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.82■■□□□ 1.08
CLIC4Q9Y696 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.82■■□□□ 1.08
CLIC4Q9Y696 RN7SL471P-201ENST00000580476 299 ntBASIC21.82■■□□□ 1.08
CLIC4Q9Y696 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.82■■□□□ 1.08
CLIC4Q9Y696 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLIC4Q9Y696 AC073648.6-201ENST00000641589 218 ntBASIC21.82■■□□□ 1.08
CLIC4Q9Y696 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.82■■□□□ 1.08
CLIC4Q9Y696 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLIC4Q9Y696 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.82■■□□□ 1.08
CLIC4Q9Y696 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.82■■□□□ 1.08
CLIC4Q9Y696 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CLIC4Q9Y696 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CLIC4Q9Y696 AC093525.10-201ENST00000625130 1569 ntBASIC21.82■■□□□ 1.08
CLIC4Q9Y696 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CLIC4Q9Y696 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.82■■□□□ 1.08
CLIC4Q9Y696 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
CLIC4Q9Y696 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLIC4Q9Y696 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CLIC4Q9Y696 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLIC4Q9Y696 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLIC4Q9Y696 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLIC4Q9Y696 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLIC4Q9Y696 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLIC4Q9Y696 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLIC4Q9Y696 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLIC4Q9Y696 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CLIC4Q9Y696 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.81■■□□□ 1.08
CLIC4Q9Y696 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.81■■□□□ 1.08
CLIC4Q9Y696 MIR4651-201ENST00000582622 73 ntBASIC21.81■■□□□ 1.08
CLIC4Q9Y696 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CLIC4Q9Y696 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLIC4Q9Y696 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLIC4Q9Y696 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.81■■□□□ 1.08
CLIC4Q9Y696 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.81■■□□□ 1.08
CLIC4Q9Y696 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLIC4Q9Y696 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLIC4Q9Y696 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLIC4Q9Y696 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLIC4Q9Y696 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CLIC4Q9Y696 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.8■■□□□ 1.08
CLIC4Q9Y696 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLIC4Q9Y696 AC009113.1-201ENST00000570267 2443 ntBASIC21.8■■□□□ 1.08
CLIC4Q9Y696 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CLIC4Q9Y696 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLIC4Q9Y696 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.8■■□□□ 1.08
CLIC4Q9Y696 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CLIC4Q9Y696 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
CLIC4Q9Y696 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.8■■□□□ 1.08
CLIC4Q9Y696 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLIC4Q9Y696 KRT16P5-201ENST00000455284 522 ntBASIC21.8■■□□□ 1.08
CLIC4Q9Y696 AC006058.3-201ENST00000606217 1069 ntBASIC21.8■■□□□ 1.08
CLIC4Q9Y696 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.8■■□□□ 1.08
CLIC4Q9Y696 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CLIC4Q9Y696 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLIC4Q9Y696 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.8■■□□□ 1.08
CLIC4Q9Y696 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLIC4Q9Y696 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLIC4Q9Y696 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLIC4Q9Y696 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLIC4Q9Y696 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLIC4Q9Y696 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLIC4Q9Y696 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.79■■□□□ 1.08
CLIC4Q9Y696 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLIC4Q9Y696 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLIC4Q9Y696 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLIC4Q9Y696 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLIC4Q9Y696 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.79■■□□□ 1.08
CLIC4Q9Y696 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLIC4Q9Y696 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.79■■□□□ 1.08
CLIC4Q9Y696 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.79■■□□□ 1.08
CLIC4Q9Y696 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.79■■□□□ 1.08
CLIC4Q9Y696 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.79■■□□□ 1.08
CLIC4Q9Y696 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.79■■□□□ 1.08
CLIC4Q9Y696 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CLIC4Q9Y696 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.79■■□□□ 1.08
CLIC4Q9Y696 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.79■■□□□ 1.08
CLIC4Q9Y696 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.79■■□□□ 1.08
CLIC4Q9Y696 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CLIC4Q9Y696 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.79■■□□□ 1.08
CLIC4Q9Y696 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.79■■□□□ 1.08
CLIC4Q9Y696 WIZP1-201ENST00000531444 2299 ntBASIC21.78■■□□□ 1.08
CLIC4Q9Y696 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CLIC4Q9Y696 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLIC4Q9Y696 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLIC4Q9Y696 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms