Protein–RNA interactions for Protein: Q9Y4C2

TCAF1, TRPM8 channel-associated factor 1, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1Q9Y4C2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCAF1Q9Y4C2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCAF1Q9Y4C2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCAF1Q9Y4C2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TCAF1Q9Y4C2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.2■□□□□ 0.66
TCAF1Q9Y4C2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.2■□□□□ 0.66
TCAF1Q9Y4C2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCAF1Q9Y4C2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.2■□□□□ 0.66
TCAF1Q9Y4C2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.2■□□□□ 0.66
TCAF1Q9Y4C2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.2■□□□□ 0.66
TCAF1Q9Y4C2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TCAF1Q9Y4C2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCAF1Q9Y4C2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.2■□□□□ 0.66
TCAF1Q9Y4C2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.2■□□□□ 0.66
TCAF1Q9Y4C2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.2■□□□□ 0.66
TCAF1Q9Y4C2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCAF1Q9Y4C2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 FAM201B-201ENST00000458407 597 ntBASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 AL353708.3-201ENST00000610272 989 ntBASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCAF1Q9Y4C2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 TSPY20P-201ENST00000450910 630 ntBASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 AP002982.1-201ENST00000492365 877 ntBASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 ITM2C-210ENST00000620962 501 ntBASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCAF1Q9Y4C2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCAF1Q9Y4C2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.17■□□□□ 0.66
TCAF1Q9Y4C2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TCAF1Q9Y4C2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCAF1Q9Y4C2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TCAF1Q9Y4C2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.17■□□□□ 0.66
TCAF1Q9Y4C2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCAF1Q9Y4C2 AC004980.1-204ENST00000429707 299 ntBASIC19.17■□□□□ 0.66
TCAF1Q9Y4C2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.17■□□□□ 0.66
TCAF1Q9Y4C2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.17■□□□□ 0.66
TCAF1Q9Y4C2 AC131212.4-201ENST00000623606 975 ntBASIC19.17■□□□□ 0.66
TCAF1Q9Y4C2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCAF1Q9Y4C2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCAF1Q9Y4C2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCAF1Q9Y4C2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCAF1Q9Y4C2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCAF1Q9Y4C2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.17■□□□□ 0.66
TCAF1Q9Y4C2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCAF1Q9Y4C2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCAF1Q9Y4C2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCAF1Q9Y4C2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms