Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 AC069236.1-201ENST00000604339 616 ntBASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
C12orf4Q9NQ89 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
C12orf4Q9NQ89 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
C12orf4Q9NQ89 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.58■□□□□ 0.25
C12orf4Q9NQ89 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
C12orf4Q9NQ89 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
C12orf4Q9NQ89 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
C12orf4Q9NQ89 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
C12orf4Q9NQ89 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.58■□□□□ 0.25
C12orf4Q9NQ89 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 AC068338.2-201ENST00000563278 1430 ntBASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
C12orf4Q9NQ89 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 AC016769.1-201ENST00000409132 1010 ntBASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 CNN2P6-201ENST00000439038 900 ntBASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 CYP2T3P-201ENST00000601990 817 ntBASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 AC008694.1-202ENST00000636953 945 ntBASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
C12orf4Q9NQ89 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms