Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS33BQ9H267 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS33BQ9H267 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS33BQ9H267 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS33BQ9H267 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS33BQ9H267 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS33BQ9H267 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS33BQ9H267 BAALC-202ENST00000306391 243 ntTSL 5 BASIC23.01■■□□□ 1.27
VPS33BQ9H267 BAALC-204ENST00000330955 222 ntTSL 5 BASIC23.01■■□□□ 1.27
VPS33BQ9H267 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
VPS33BQ9H267 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC23.01■■□□□ 1.27
VPS33BQ9H267 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC23.01■■□□□ 1.27
VPS33BQ9H267 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC23.01■■□□□ 1.27
VPS33BQ9H267 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
VPS33BQ9H267 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
VPS33BQ9H267 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC23.01■■□□□ 1.27
VPS33BQ9H267 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS33BQ9H267 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS33BQ9H267 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
VPS33BQ9H267 AL162377.1-201ENST00000618844 1793 ntBASIC23.01■■□□□ 1.27
VPS33BQ9H267 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
VPS33BQ9H267 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS33BQ9H267 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.01■■□□□ 1.27
VPS33BQ9H267 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.01■■□□□ 1.27
VPS33BQ9H267 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC23.01■■□□□ 1.27
VPS33BQ9H267 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
VPS33BQ9H267 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
VPS33BQ9H267 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
VPS33BQ9H267 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS33BQ9H267 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.01■■□□□ 1.27
VPS33BQ9H267 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC23■■□□□ 1.27
VPS33BQ9H267 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
VPS33BQ9H267 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
VPS33BQ9H267 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
VPS33BQ9H267 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23■■□□□ 1.27
VPS33BQ9H267 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
VPS33BQ9H267 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
VPS33BQ9H267 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC23■■□□□ 1.27
VPS33BQ9H267 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
VPS33BQ9H267 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC23■■□□□ 1.27
VPS33BQ9H267 AC009078.2-202ENST00000463353 338 ntBASIC23■■□□□ 1.27
VPS33BQ9H267 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
VPS33BQ9H267 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC23■■□□□ 1.27
VPS33BQ9H267 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
VPS33BQ9H267 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
VPS33BQ9H267 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC22.99■■□□□ 1.27
VPS33BQ9H267 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
VPS33BQ9H267 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS33BQ9H267 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS33BQ9H267 GAS2L1P1-201ENST00000420145 1480 ntBASIC22.99■■□□□ 1.27
VPS33BQ9H267 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC22.99■■□□□ 1.27
VPS33BQ9H267 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS33BQ9H267 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS33BQ9H267 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
VPS33BQ9H267 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS33BQ9H267 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC22.99■■□□□ 1.27
VPS33BQ9H267 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
VPS33BQ9H267 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS33BQ9H267 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
VPS33BQ9H267 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC22.99■■□□□ 1.27
VPS33BQ9H267 AL732292.2-201ENST00000609649 430 ntBASIC22.99■■□□□ 1.27
VPS33BQ9H267 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
VPS33BQ9H267 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
VPS33BQ9H267 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS33BQ9H267 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC22.99■■□□□ 1.27
VPS33BQ9H267 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC22.98■■□□□ 1.27
VPS33BQ9H267 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
VPS33BQ9H267 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
VPS33BQ9H267 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
VPS33BQ9H267 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
VPS33BQ9H267 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
VPS33BQ9H267 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC22.98■■□□□ 1.27
VPS33BQ9H267 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
VPS33BQ9H267 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
VPS33BQ9H267 KRT18P31-201ENST00000506277 1292 ntBASIC22.98■■□□□ 1.27
VPS33BQ9H267 GPALPP1-207ENST00000611650 899 ntBASIC22.98■■□□□ 1.27
VPS33BQ9H267 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC22.98■■□□□ 1.27
VPS33BQ9H267 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC22.98■■□□□ 1.27
VPS33BQ9H267 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
VPS33BQ9H267 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.97■■□□□ 1.27
VPS33BQ9H267 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
VPS33BQ9H267 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
VPS33BQ9H267 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
VPS33BQ9H267 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
VPS33BQ9H267 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC22.97■■□□□ 1.27
VPS33BQ9H267 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC22.97■■□□□ 1.27
VPS33BQ9H267 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
VPS33BQ9H267 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
VPS33BQ9H267 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
VPS33BQ9H267 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
VPS33BQ9H267 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC22.97■■□□□ 1.27
VPS33BQ9H267 AP000867.3-201ENST00000524675 377 ntBASIC22.97■■□□□ 1.27
VPS33BQ9H267 PNN-202ENST00000553331 656 ntTSL 3 BASIC22.97■■□□□ 1.27
VPS33BQ9H267 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
VPS33BQ9H267 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
VPS33BQ9H267 AC090616.6-201ENST00000582640 721 ntBASIC22.97■■□□□ 1.27
VPS33BQ9H267 GXYLT1P4-201ENST00000613576 1192 ntBASIC22.97■■□□□ 1.27
VPS33BQ9H267 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC22.97■■□□□ 1.27
VPS33BQ9H267 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
VPS33BQ9H267 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms