Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 LINC01529-204ENST00000636474 1715 ntBASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CYSTM1Q9H1C7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 AC026691.1-201ENST00000602502 2017 ntBASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 MED25-210ENST00000612854 801 ntTSL 5 BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 MED25-214ENST00000622402 642 ntTSL 5 BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms