Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP4Q9BWG4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.42□□□□□ -0.1
SSBP4Q9BWG4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 AL139246.5-201ENST00000606645 996 ntBASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 Z98044.1-201ENST00000632503 1764 ntBASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSBP4Q9BWG4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 KRT19P1-201ENST00000405746 1186 ntBASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP4Q9BWG4 TEX21P-204ENST00000641479 1693 ntBASIC14.39□□□□□ -0.11
SSBP4Q9BWG4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP4Q9BWG4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP4Q9BWG4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.39□□□□□ -0.11
SSBP4Q9BWG4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.39□□□□□ -0.11
SSBP4Q9BWG4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.39□□□□□ -0.11
SSBP4Q9BWG4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP4Q9BWG4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP4Q9BWG4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
SSBP4Q9BWG4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP4Q9BWG4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP4Q9BWG4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP4Q9BWG4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.39□□□□□ -0.11
SSBP4Q9BWG4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SSBP4Q9BWG4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.39□□□□□ -0.11
SSBP4Q9BWG4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.39□□□□□ -0.11
SSBP4Q9BWG4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.39□□□□□ -0.11
SSBP4Q9BWG4 AC100791.3-201ENST00000617619 330 ntBASIC14.39□□□□□ -0.11
SSBP4Q9BWG4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP4Q9BWG4 MYCNOS-205ENST00000641950 531 ntBASIC14.39□□□□□ -0.11
SSBP4Q9BWG4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP4Q9BWG4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP4Q9BWG4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms