Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EBF4Q9BQW3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EBF4Q9BQW3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
EBF4Q9BQW3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.64■□□□□ 0.57
EBF4Q9BQW3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.64■□□□□ 0.57
EBF4Q9BQW3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.64■□□□□ 0.57
EBF4Q9BQW3 OR10C1-204ENST00000622521 1039 ntBASIC18.64■□□□□ 0.57
EBF4Q9BQW3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EBF4Q9BQW3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EBF4Q9BQW3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
EBF4Q9BQW3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EBF4Q9BQW3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EBF4Q9BQW3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
EBF4Q9BQW3 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.63■□□□□ 0.57
EBF4Q9BQW3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 AC124283.5-201ENST00000624661 1809 ntBASIC18.63■□□□□ 0.57
EBF4Q9BQW3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EBF4Q9BQW3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.62■□□□□ 0.57
EBF4Q9BQW3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EBF4Q9BQW3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EBF4Q9BQW3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EBF4Q9BQW3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
EBF4Q9BQW3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EBF4Q9BQW3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.62■□□□□ 0.57
EBF4Q9BQW3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EBF4Q9BQW3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.62■□□□□ 0.57
EBF4Q9BQW3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
EBF4Q9BQW3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EBF4Q9BQW3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EBF4Q9BQW3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.62■□□□□ 0.57
EBF4Q9BQW3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EBF4Q9BQW3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.62■□□□□ 0.57
EBF4Q9BQW3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EBF4Q9BQW3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EBF4Q9BQW3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 AC016769.1-201ENST00000409132 1010 ntBASIC18.61■□□□□ 0.57
EBF4Q9BQW3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 AC126763.1-201ENST00000552015 2118 ntBASIC18.61■□□□□ 0.57
EBF4Q9BQW3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
EBF4Q9BQW3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
EBF4Q9BQW3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
EBF4Q9BQW3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EBF4Q9BQW3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EBF4Q9BQW3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EBF4Q9BQW3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.6■□□□□ 0.57
EBF4Q9BQW3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.6■□□□□ 0.57
EBF4Q9BQW3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EBF4Q9BQW3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.6■□□□□ 0.57
EBF4Q9BQW3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.6■□□□□ 0.57
EBF4Q9BQW3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.6■□□□□ 0.57
EBF4Q9BQW3 AC083906.6-201ENST00000641366 219 ntBASIC18.6■□□□□ 0.57
EBF4Q9BQW3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EBF4Q9BQW3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms