Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SETD9Q8NE22 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
SETD9Q8NE22 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SETD9Q8NE22 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SETD9Q8NE22 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SETD9Q8NE22 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SETD9Q8NE22 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.56■□□□□ 0.4
SETD9Q8NE22 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SETD9Q8NE22 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.56■□□□□ 0.4
SETD9Q8NE22 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SETD9Q8NE22 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SETD9Q8NE22 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.56■□□□□ 0.4
SETD9Q8NE22 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SETD9Q8NE22 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SETD9Q8NE22 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SETD9Q8NE22 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.56■□□□□ 0.4
SETD9Q8NE22 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.56■□□□□ 0.4
SETD9Q8NE22 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.56■□□□□ 0.4
SETD9Q8NE22 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SETD9Q8NE22 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.56■□□□□ 0.4
SETD9Q8NE22 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SETD9Q8NE22 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SETD9Q8NE22 AL162741.1-201ENST00000565563 1558 ntBASIC17.56■□□□□ 0.4
SETD9Q8NE22 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
SETD9Q8NE22 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SETD9Q8NE22 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SETD9Q8NE22 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SETD9Q8NE22 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SETD9Q8NE22 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.55■□□□□ 0.4
SETD9Q8NE22 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SETD9Q8NE22 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.55■□□□□ 0.4
SETD9Q8NE22 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SETD9Q8NE22 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SETD9Q8NE22 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SETD9Q8NE22 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
SETD9Q8NE22 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SETD9Q8NE22 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SETD9Q8NE22 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.55■□□□□ 0.4
SETD9Q8NE22 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SETD9Q8NE22 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SETD9Q8NE22 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.55■□□□□ 0.4
SETD9Q8NE22 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.55■□□□□ 0.4
SETD9Q8NE22 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SETD9Q8NE22 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SETD9Q8NE22 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.55■□□□□ 0.4
SETD9Q8NE22 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SETD9Q8NE22 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SETD9Q8NE22 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.55■□□□□ 0.4
SETD9Q8NE22 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SETD9Q8NE22 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SETD9Q8NE22 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.55■□□□□ 0.4
SETD9Q8NE22 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SETD9Q8NE22 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.55■□□□□ 0.4
SETD9Q8NE22 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SETD9Q8NE22 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.54■□□□□ 0.4
SETD9Q8NE22 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SETD9Q8NE22 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SETD9Q8NE22 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SETD9Q8NE22 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SETD9Q8NE22 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SETD9Q8NE22 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.54■□□□□ 0.4
SETD9Q8NE22 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SETD9Q8NE22 TERF1P5-201ENST00000477545 1207 ntBASIC17.54■□□□□ 0.4
SETD9Q8NE22 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.54■□□□□ 0.4
SETD9Q8NE22 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SETD9Q8NE22 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SETD9Q8NE22 MYCNOS-205ENST00000641950 531 ntBASIC17.54■□□□□ 0.4
SETD9Q8NE22 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SETD9Q8NE22 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.54■□□□□ 0.4
SETD9Q8NE22 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SETD9Q8NE22 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SETD9Q8NE22 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SETD9Q8NE22 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SETD9Q8NE22 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.54■□□□□ 0.4
SETD9Q8NE22 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SETD9Q8NE22 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SETD9Q8NE22 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SETD9Q8NE22 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SETD9Q8NE22 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SETD9Q8NE22 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SETD9Q8NE22 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.53■□□□□ 0.4
SETD9Q8NE22 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SETD9Q8NE22 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SETD9Q8NE22 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SETD9Q8NE22 AC067852.2-201ENST00000590513 2313 ntBASIC17.53■□□□□ 0.4
SETD9Q8NE22 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SETD9Q8NE22 YBX1P1-201ENST00000445822 960 ntBASIC17.53■□□□□ 0.4
SETD9Q8NE22 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
SETD9Q8NE22 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.53■□□□□ 0.4
SETD9Q8NE22 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.53■□□□□ 0.4
SETD9Q8NE22 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.53■□□□□ 0.4
SETD9Q8NE22 UBE2DNL-204ENST00000602536 740 ntBASIC17.53■□□□□ 0.4
SETD9Q8NE22 AC083906.6-201ENST00000641366 219 ntBASIC17.53■□□□□ 0.4
SETD9Q8NE22 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SETD9Q8NE22 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SETD9Q8NE22 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.53■□□□□ 0.4
SETD9Q8NE22 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SETD9Q8NE22 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SETD9Q8NE22 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.53■□□□□ 0.4
SETD9Q8NE22 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms