Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IRX4P78413 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.85■□□□□ 0.77
IRX4P78413 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
IRX4P78413 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IRX4P78413 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
IRX4P78413 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
IRX4P78413 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IRX4P78413 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IRX4P78413 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
IRX4P78413 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX4P78413 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.84■□□□□ 0.77
IRX4P78413 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX4P78413 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.84■□□□□ 0.77
IRX4P78413 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX4P78413 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IRX4P78413 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
IRX4P78413 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.84■□□□□ 0.77
IRX4P78413 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX4P78413 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX4P78413 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX4P78413 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX4P78413 AL137013.1-201ENST00000432946 1228 ntBASIC19.84■□□□□ 0.77
IRX4P78413 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.84■□□□□ 0.77
IRX4P78413 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IRX4P78413 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IRX4P78413 AP002982.1-201ENST00000492365 877 ntBASIC19.84■□□□□ 0.77
IRX4P78413 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.84■□□□□ 0.77
IRX4P78413 TREX1-205ENST00000625293 1783 ntBASIC19.84■□□□□ 0.77
IRX4P78413 AC004408.2-201ENST00000623613 2777 ntBASIC19.84■□□□□ 0.77
IRX4P78413 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.84■□□□□ 0.77
IRX4P78413 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.84■□□□□ 0.77
IRX4P78413 CYP2D8P-201ENST00000433633 1490 ntBASIC19.84■□□□□ 0.77
IRX4P78413 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IRX4P78413 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
IRX4P78413 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX4P78413 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IRX4P78413 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX4P78413 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX4P78413 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IRX4P78413 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.83■□□□□ 0.77
IRX4P78413 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.83■□□□□ 0.77
IRX4P78413 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
IRX4P78413 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.83■□□□□ 0.77
IRX4P78413 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
IRX4P78413 NAPSB-206ENST00000562112 1266 ntBASIC19.83■□□□□ 0.77
IRX4P78413 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
IRX4P78413 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
IRX4P78413 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
IRX4P78413 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
IRX4P78413 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.83■□□□□ 0.76
IRX4P78413 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.83■□□□□ 0.76
IRX4P78413 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
IRX4P78413 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.83■□□□□ 0.76
IRX4P78413 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.83■□□□□ 0.76
IRX4P78413 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
IRX4P78413 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX4P78413 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
IRX4P78413 KRT18P22-201ENST00000402024 1347 ntBASIC19.82■□□□□ 0.76
IRX4P78413 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX4P78413 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX4P78413 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX4P78413 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX4P78413 TERF1P1-201ENST00000311003 1181 ntBASIC19.82■□□□□ 0.76
IRX4P78413 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
IRX4P78413 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
IRX4P78413 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.82■□□□□ 0.76
IRX4P78413 AL390955.1-201ENST00000428694 934 ntBASIC19.82■□□□□ 0.76
IRX4P78413 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.82■□□□□ 0.76
IRX4P78413 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.82■□□□□ 0.76
IRX4P78413 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX4P78413 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
IRX4P78413 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
IRX4P78413 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
IRX4P78413 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX4P78413 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX4P78413 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.82■□□□□ 0.76
IRX4P78413 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
IRX4P78413 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
IRX4P78413 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
IRX4P78413 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
IRX4P78413 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.81■□□□□ 0.76
IRX4P78413 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
IRX4P78413 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
IRX4P78413 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.81■□□□□ 0.76
IRX4P78413 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
IRX4P78413 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.81■□□□□ 0.76
IRX4P78413 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
IRX4P78413 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
IRX4P78413 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.81■□□□□ 0.76
IRX4P78413 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
IRX4P78413 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
IRX4P78413 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
IRX4P78413 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
IRX4P78413 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
IRX4P78413 AC023632.3-201ENST00000521633 145 ntBASIC19.81■□□□□ 0.76
IRX4P78413 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.81■□□□□ 0.76
IRX4P78413 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.81■□□□□ 0.76
IRX4P78413 NTF6B-201ENST00000591913 560 ntBASIC19.81■□□□□ 0.76
IRX4P78413 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.81■□□□□ 0.76
IRX4P78413 AC004264.1-201ENST00000608354 794 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms